KEGG   Xenopus laevis (African clawed frog): 108708444
Entry
108708444         CDS       T01010                                 
Name
(RefSeq) cohesin subunit SA-2 isoform X1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108708444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108708444
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    108708444
SSDB
Motif
Pfam: STAG SCD LD_cluster3 Arg_tRNA_synt_N
Other DBs
NCBI-GeneID: 108708444
NCBI-ProteinID: XP_018102639
UniProt: A0A8J0UG44
Position
2L:119610012..119670337
AA seq 1149 aa
MKAKKIRRQSENQSRKSSGRRSRDSGIINGDRAEAVTLFEVICIGKGAIQSVVSDWVEVY
QEDRDAALLDLLNFYIQCSGCQGVVTAEMFQNQGDQDIVQRLTEEFDEETGLQFKKFMAF
PWILTITWPNNMENGDYPLSKAGTFWKKFRANICELTSVLVQKCQYNAIYDGYLLDTVIS
LLLGLSDSCIRAFRHTSTLSALKLHTALVRIILNLETSIHNLQRLYNVEQKRFTLKKASY
RMEQIEKKRNEIEQKHVEITNMIDAIFKGTIVQRYRDVVPDIRALCIEELGIWMKMYPQV
YLNDSCLKYIGWMLYDKVPDVRMKSLLSLQGLYERKDFVAKMDLFNTRFKDRIISMTLDR
DHDVSLQAMKLLMFMSQNCEDLLTKEDCDYVYQCVYTAYRPLATAAGEFLYKRHLNQKEG
EESRGTIHNAQAQQLKILLTFFSENKLHEHLTYLVDSLWDCNSRLLKDWQCMSSVLLQAT
QDREDALNAIQQRLLIELLLASVRQAVEVHPPVGRGTVRKWVINRGDIARPTTATGSFKM
LSAKEKKVQLEDHIKITEHFAQTLPLLLAKYLTDQRNVANLLQILQYFKFEVYSTKGLDK
ELEALLNELKHVALTHSDPEVLEACSKAYISLGKEDLEHHVSVGLAKREMIEQLVDTFSQ
MLHDLLQEEEEPLSSEGVHQMSCVLRKLAAFHNAHDPTEWNLYEKTSQLLQYDVENCCFS
VQLLVPAFQCMYYALLWNVVAVMEDILSKEDPVLFREHVATFWQLCKHYLNHIDGSVQEQ
AFMSMCDILLLLSQHRNGIYCCMDSALQSELFSFVQHHVFQSDDVKHKGVNGKEKDKTVN
SEGLHKRRNLLAAYCKLIANNIVEMAAASEIYKQYMKTYNDFGDIIKETLSRTRQTDKIE
STRTLILCLEQLFQKHREAFGSATLTSPSFFNIKEMARRFSLTFGMDQAKCRESVVMIHK
QGIEFVFREPALEDNLPPPNLPFLIPISEFSGKLLKADKRLVYGYLQRFANERMLLCEGT
EWNPLVVYSHSLLDNVDEESSFTSSNYSRDLKTSSPTKRKPIAVRRVIPEEPKMYYPVQR
RKRHLLHGENVDDEISLCSSLSHSLQRSVKRLSSHGDADEGKEDVEVDEVLVSKEIILHT
ESESQDSTG
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgaaggccaagaaaatccgaagacagtctgaaaaccaatctcgcaaaagttctgggaga
agaagcagggacagtggaatcatcaatggagatagagctgaagctgtaacactttttgaa
gtcatttgcattgggaaaggggcaattcagtctgtggtgagtgactgggttgaagtctat
caagaagacagagatgcagcattacttgaccttctaaatttttacattcagtgctcagga
tgtcaaggggtggttactgcagaaatgtttcagaatcaaggggaccaggacatagtgcag
aggcttacagaggagtttgatgaagaaacaggtttacagttcaagaaatttatggctttt
ccttggattctcacaattacatggccaaataacatggaaaatggagactatccactgtcc
aaagcaggaacgttctggaaaaaattcagggcaaatatctgtgaactaacatctgtactt
gtgcagaagtgtcagtacaatgctatttatgatggatatcttctggacacagttatctca
cttttgcttggcttatcagactcatgcatcagggcattcagacatacaagcactttatca
gctttgaagctgcacactgccctagtgaggattattcttaatcttgaaaccagtatacat
aatttacaaagactgtacaatgtggagcaaaagcgcttcactttgaaaaaggctagctac
agaatggagcaaattgagaaaaaaaggaacgagattgagcagaaacacgttgaaattaca
aatatgatagatgctatatttaaagggaccattgtgcaacgttacagagatgtggtccct
gatataagagcactgtgtattgaagaactggggatatggatgaaaatgtaccctcaagtc
tatttgaatgatagctgcttgaaatacattggatggatgctgtacgataaggtgcctgat
gttcgcatgaaaagtctactttctctacaagggctttatgagaggaaggattttgttgcc
aaaatggatttattcaataccaggtttaaggatcgtattatatcaatgacgctagaccga
gaccatgatgtgtctctacaagcaatgaaactccttatgtttatgtcacagaattgtgaa
gatctgttaacaaaagaggactgtgattatgtgtaccagtgtgtatacacagcttacaga
cccctggctacagcagctggggaatttctatataaaaggcatctaaatcaaaaagaagga
gaggaaagcagagggactatacacaatgcccaagcccaacaattaaagattctcttaact
ttcttctctgaaaataagctgcacgagcatctgacttaccttgttgacagcctctgggac
tgcaattctagacttcttaaagactggcaatgcatgtcatcagttctgcttcaagccact
caagacagggaagatgctttgaatgccattcaacaaaggctactgattgaacttctcttg
gcaagtgtgagacaagcagttgaagtgcaccctcctgtgggaagagggacagtacgaaag
tgggttatcaatagaggagacattgctagaccaacaacggcaacaggcagcttcaagatg
ctctcagccaaggagaagaaagtgcagctggaagatcatataaagattactgagcatttt
gctcaaaccctccctttgcttctagctaagtatttaactgaccaaagaaatgtggcaaac
cttttacagatcctgcagtattttaaatttgaggtttattccactaagggtttggataag
gagttggaggccttgctaaatgagttgaaacatgtagcattgacccactcagatcctgag
gtgctagaggcttgttctaaagcttacatcagcctgggcaaagaggacctggagcatcat
gtcagtgtcggccttgctaagagagagatgatagagcaacttgtggacacgttcagccag
atgctgcatgatctgttacaagaggaagaagagcctctgagttcagaaggtgtgcaccag
atgtcctgcgttttacgaaagctggcagcttttcacaatgcacatgaccccacggagtgg
aatctgtatgagaaaacctcacagctgctgcagtatgatgtagaaaactgctgtttttct
gttcagctgctagtgccggctttccagtgcatgtattatgcccttctctggaatgtggtg
gctgtaatggaagatatactttccaaggaggaccctgttctttttagggaacacgtggca
actttttggcagctatgtaaacattatcttaatcacatagatggatctgtacaggagcag
gcattcatgtcaatgtgtgacatacttctcttgctaagtcagcatagaaacggaatatac
tgctgcatggattctgcactgcagtcagagctgttttcatttgtccagcatcatgtgttt
caaagtgatgacgtaaaacacaaaggtgtaaatggaaaagaaaaagacaaaacagtgaac
tcggaaggtttgcacaagaggcggaatctactggctgcatactgtaaacttatagctaac
aatattgtggaaatggctgcagcttcagagatttacaagcagtatatgaagacctataat
gactttggagacataattaaggaaaccttaagtcggacaagacagactgacaaaatagag
agcacaagaactctgatcctttgtttggaacagctgttccagaagcacagagaagcattt
ggcagtgccaccctgacctccccttcattctttaacataaaggagatggccagacgcttt
tctctaaccttcggcatggaccaagcgaaatgcagagaatctgttgttatgatacacaaa
caaggaattgagtttgttttccgggagccagccttagaagataatctcccaccaccaaat
cttccattcctgatcccgattagtgaattttctggcaaacttctgaaagccgacaagaga
cttgtgtatggctatctgcagaggtttgctaatgagcgaatgcttctatgtgaaggaaca
gaatggaacccactggttgtctatagccactctctgttagataatgtcgatgaggagagc
tctttcaccagcagcaactattcccgagacttgaaaacgtcaagtcctacaaagaggaag
ccaattgctgtacggagagtaattccggaagaaccgaagatgtattatcccgtgcagagg
aggaaaagacacttgctgcatggagaaaatgtagatgatgaaatatcattgtgcagctct
ctttcccatagccttcagcgttcagtgaaacgattgtccagtcatggagatgcagatgaa
ggaaaggaagatgttgaagtagatgaggttttagtaagcaaggagattattctacatacc
gagagcgagagtcaagattccactggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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