KEGG   Xenopus laevis (African clawed frog): 108715634
Entry
108715634         CDS       T01010                                 
Symbol
lamc1.S
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04510  Focal adhesion
xla04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108715634 (lamc1.S)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108715634 (lamc1.S)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Alanine_zipper MCPsignal
Other DBs
NCBI-GeneID: 108715634
NCBI-ProteinID: XP_018116459
Xenbase: XB-GENE-6485731
UniProt: A0A1L8GG24 A0A974HM92
Position
4S:complement(79634058..79723427)
AA seq 1595 aa
MCWRMRAPVVAVMLLLLGTVRAAMDECYEEGRPQRCMPEFVNAAFNVTVVATNTCGSPPE
EYCVQTGVTGVTKSCHTCDANNFHLQHGADYLTDYNNQAEITWWQSQTMLAGIQYPNSIN
LTLHLGKAFDITYVRLKFHTSRPESFTLYKRTREDGPWIPYQYYSGSCEKTYQKFNRGFI
RTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLN
RLNTFGDEVFSDPKVLKSYYYAISDFAVGGRCKCNGHASECVRNEFEKLVCNCKHNTFGS
DCEKCLPFYNDRPWRRSTADSPNECLPCNCNGRSQECYFDPELYRSTGHGGHCIGCIDNT
DGPNCERCRENYYRQNSNEPCHACQCNPVGSLSTQCDNFGRCSCKPGVMGEKCDRCQPGF
HSLTEAGCRPCACNPAGSTDECNVETGRCSCKDNVEGFNCERCKPGFFHLDEANPRGCTP
CFCYGHSSVCSSAEGYRVSSIVSTFESGVEAWTAQQRDGSEYSLSWVSESSAVSVISESY
FPIYFIAPAKFLGNQGASYGQNLTFSFRVERRDTRLSAEDLVLEGAGLRVSVPLIAQGNS
YPSESTQPYVFRMHEATDYPWRPSVSPFEFQKLLQNLTAIKIRGTYSERSAGFLEEVSLV
TAEAGVGPSASWVEMCSCPIGYIGQFCERCASGYRRENPSLGPYSPCVLCTCNGHSDTCD
PESGVCDCQHNTAGTHCERCSEGYYGDSTTGSASDCQPCPCPGGSSCAVVPRTKEVVCTN
CPLGTTGKRCELCDDGYFGDPLGADGAPRPCRICECSNNIDPNAVGNCDRLTGECLKCIY
NTGGFYCDRCQDGFYGNPLAQNPDIKCRACSCNQYGTVKGQSGCNQVTGQCECLPHVTER
DCSACEPGFYNLLSGGGCERCDCHPLGSTNGQCDVHTGQCECHPGISGQQCQQCEPNHFG
FGPEGCKPCDCDPEGSSSLQCKEDGHCECNSGFVGIRCDQCEENYFYNRSGPGCQECPAC
YRLVKDKVNEQRAKLQELEDLLKNLGTGEETITDQAFEERLREAEKAVTDLLLDAQSSKD
VDQGMLDRLAEINTTLSFQLERLQNIRDMIRDTDKQAQEARDRVEGTELIIESARAQLER
AKVAIANVSITPPETTGDPNNMTLLAEEARKLAERHMQEAREIEKAAKEANDTANEALRL
LQKTLAAENQTALDIEELNRKYAQAKDIARELEKQASKVHAEAEEAGNRALQIYANLTSL
PQIDTTALQNEADKIQKEAEELDSLIDRKMRDYEDLREDMRGREMEVKNLLDKGKTEQQT
ADQLLARADAAKAQAEEAAKKGRETLQEANDILNKLRDFDKRVNDNKTAAEAALRKIPMI
TQTIAEANNKTRQAESALGNANADARGAKSKAEEAEALANTVQKKAATARAEADNTFKEV
TDLDGELQDMLKQLQEAETQLKKKQAEAENDEKMAEMASNATQEAESNANRAKKSVNGVL
VMIDELLSRLGQLESVDVGQLTELERTLDDAKNQLSDSDLDRKLAELQESSNLQKAALES
YDQDIKQILQDIDNLEDIRKTLPAGCFNTPIIEKP
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgtgctggaggatgcgggccccggtggtggccgtgatgctgctactgctcgggacagtg
cgggccgcaatggatgaatgttatgaggaagggagaccccagcgctgcatgcccgagttt
gtgaatgcggcgtttaacgtgacagttgtagccaccaacacgtgcggctctcccccggag
gagtactgcgtgcagaccggagtcaccggcgtaaccaagtcgtgccacacctgcgacgcc
aacaactttcacctgcaacacggcgccgactacctgactgactataacaaccaggcggaa
atcacgtggtggcagagccagactatgctggccgggatccagtaccccaactccatcaac
ctgaccctgcacctcggaaaggcctttgacatcacttatgtgcggttgaagttccacaca
agtcgccctgaaagctttaccctctacaagcgaacgcgagaggatgggccgtggattcca
taccagtattacagtggctcatgcgagaaaacctaccaaaagttcaatagaggcttcatc
cgcactggagaggatgaacagcaagcattgtgtactgatgaattcagtgatatctcacca
ttaacagggggcaacgtggccttttctaccctcgagggacgacccagtgcttacaatttt
gacaacagccctgtattacaggagtgggtgactgctacagatattcgtgtgaccctgaac
agattgaacacgtttggagatgaagtttttagtgaccctaaagtgctcaaatcttactat
tatgccatttctgactttgctgtcgggggcaggtgtaaatgtaatggccatgccagcgag
tgcgtgcgtaatgagtttgagaagcttgtgtgcaactgtaaacacaacacttttggcagt
gactgtgagaaatgcttacccttctataatgaccggccctggaggagatcaactgctgac
agtcctaacgagtgtcttccctgtaattgtaatggacgctcccaggagtgctacttcgat
ccggaactgtaccgctctacaggacatggtggacattgcattggctgtattgacaatact
gatgggccaaactgtgagcggtgccgtgagaattattatcgtcagaatagcaatgagccc
tgccatgcctgtcaatgcaaccctgttggctctctcagtactcagtgtgacaactttgga
cgctgtagctgcaaacctggtgtgatgggggagaaatgtgacagatgccagcctggcttc
cattcgcttactgaagctggttgcaggccctgtgcatgtaatccggcaggcagcacagac
gaatgcaatgtagagacaggccgctgcagctgtaaggataacgtggaaggattcaactgt
gagagatgtaaaccaggattcttccacctggatgaggctaacccacgaggctgtactcca
tgcttctgctatggccattcctcggtgtgtagcagtgcagaaggataccgtgtcagcagc
attgtctccacatttgagagtggcgtggaggcctggacggcacaacagagggatggatct
gaatattcactatcctgggtttctgaaagcagtgcagtttctgtcatttctgagagctac
tttcccatttatttcattgcaccagcaaaatttttaggaaaccaaggtgcaagttatggg
cagaacctcacttttagcttccgtgtggaacgccgggatactcgactttctgcagaggat
cttgtgctagaaggtgccggactcagggtatctgtgcctctcattgcccagggaaactcc
tatcccagtgaaagtactcaaccctatgtgttcaggatgcatgaagccactgactatcca
tggagaccatcagtttcaccttttgaatttcagaagttgttgcagaatcttacagcaatc
aagatcagaggaacctacagtgaacgcagtgctggatttctagaggaggtcagcctggta
actgctgaggcaggtgttggtccttctgcctcatgggtggagatgtgcagctgtcccatt
ggctatattgggcagttctgtgagaggtgtgcttctggctaccgaagagagaacccaagc
ctgggaccttacagtccttgtgtgctgtgtacatgtaatggccacagtgacacatgtgac
cctgagtctggtgtctgtgactgccaacataacaccgcaggtactcactgtgagagatgc
agtgaaggttattatggagacagcacaactggtagcgcatccgactgccaaccctgtcca
tgcccaggagggtcaagctgtgctgttgtaccaaggacaaaggaggtcgtttgtactaac
tgccccctggggactacaggaaagcgttgtgagctgtgtgatgatggctactttggagac
ccacttggtgcagatggagccccccgaccatgtcgtatttgtgagtgcagcaacaacatc
gaccccaatgctgttggtaactgtgatcgtctgactggagagtgtctgaaatgtatctac
aacacgggtggattttactgtgaccgatgccaagatggcttttatgggaaccctctggcc
caaaaccctgacattaaatgcagagcttgcagttgtaaccagtatggaactgtcaaggga
caaagtggctgcaaccaggtgactggacagtgtgagtgcctgcctcatgtcacagaacgg
gattgttcagcttgtgagccaggattctacaacctgctgagtggcggtggctgtgaaaga
tgtgattgccatcccctaggctccaccaatggtcagtgtgatgttcatacaggacagtgt
gagtgccatcctggcattagtggccaacaatgccagcagtgtgagccaaaccactttgga
ttcggcccagaaggctgcaaaccctgtgactgtgatcctgaaggctccagttctcttcaa
tgtaaagaggatggccactgtgagtgcaacagtggatttgtcggcatccgctgtgatcag
tgtgaggaaaattacttctataacagatctggtccagggtgccaggagtgtcccgcttgc
tatcggttggttaaagataaggtgaatgagcaacgggcaaagttgcaggaactagaggat
ctcctgaagaacttgggtacaggagaggaaaccattaccgaccaggcttttgaggagagg
ctcagagaggctgaaaaagctgtgactgaccttctcctggatgcccagagcagtaaagat
gtagatcagggcatgctggatagacttgcagagataaacactactttgagcttccagtta
gaacgtctgcagaacataagagatatgatccgtgacacagacaagcaggcacaggaagcc
agagatcgagtagagggcacagaactaatcattgaatctgcaagagcacaactagaaaga
gccaaggtggccattgccaatgtgtcaattaccccaccagagacaactggagatccaaac
aatatgacactgcttgcagaagaagcaaggaagctagctgaaaggcatatgcaggaagct
cgggagattgagaaggctgctaaggaggccaatgacactgcaaatgaagcacttcgcttg
ttacaaaaaactcttgctgcagagaatcagacagccttagatattgaagaactaaatcgc
aagtatgcacaggctaaagacatagcccgggagctggaaaagcaggctagtaaggtgcat
gcagaggctgaggaggctggcaacagagcgctgcagatttatgccaatttgacatcactt
ccccaaatcgataccactgctttacagaatgaagcagacaagatccagaaagaggcagaa
gagctggattctttgattgacagaaagatgcgagactatgaggatctgcgagaggacatg
aggggtagagaaatggaagtcaaaaatctgttagataaaggaaagactgagcagcagacc
gccgaccagctacttgcccgagctgatgcagcaaaagcacaagcagaggaggctgcaaag
aagggacgtgaaacactgcaagaagctaatgatatacttaacaagctgagagattttgac
aagcgagtgaatgacaataagaccgcagcagaagctgctttacgcaagataccgatgatc
acccagaccattgcagaggctaataacaagacacgacaggcagagagtgcactgggcaat
gctaatgctgatgcacggggggcaaagagcaaggcagaggaggcagaagcactagccaat
actgtccaaaagaaagcagccactgccagggctgaggctgataacaccttcaaggaagtg
actgatttggatggggagctccaagatatgctgaaacagctacaagaagcagagactcag
ctgaagaagaagcaggctgaagcagaaaatgatgagaaaatggctgaaatggcctctaat
gcaacgcaggaagctgaatcaaatgccaacagggccaaaaagtctgttaatggggttctt
gtgatgatcgatgagttgctctcccgactcgggcagctagagtctgtggatgttggacaa
ctcactgaactggagaggacgctggacgatgcaaagaaccaactaagtgacagtgatttg
gacagaaaactagcagaacttcaggagtcttccaacctacagaaagctgcactagaatca
tatgatcaagacattaagcagatccttcaagatatagataatcttgaggatattagaaag
accttgcctgctggctgctttaacacccctattatcgaaaagccttaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (76)   

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