KEGG   Xenopus laevis (African clawed frog): 108715711
Entry
108715711         CDS       T01010                                 
Symbol
rnf2.S
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108715711 (rnf2.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    108715711 (rnf2.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    108715711 (rnf2.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108715711 (rnf2.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108715711 (rnf2.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     108715711 (rnf2.S)
    Noncanonical PRC1 (PRC1.1)
     108715711 (rnf2.S)
    Noncanonical PRC1 (PRC1.3/1.5)
     108715711 (rnf2.S)
    Noncanonical PRC1 (PRC1.6)
     108715711 (rnf2.S)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 zf-ANAPC11
Other DBs
NCBI-GeneID: 108715711
NCBI-ProteinID: XP_018116603
Xenbase: XB-GENE-17346467
UniProt: A0A1L8GGL2 A0A974HMG0
Position
4S:complement(92780688..92790484)
AA seq 336 aa
MTQAVQINGAQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARINKHNNQQALSHSIEEGLKIQALNRLPRGKKPQVENGSGAEDNADSSHCS
NASVHSNQEAGPSNKRTKTSDDSGLELDTNNETVSMDSVLEGGSEIELVFRPHPTLMEKD
DSAQTRFIKTSGNATVDHLSKYLAVRLALEEFRSKGENNEMSLNAASEKQYTIYIATANG
QFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgacgcaggcagtgcagattaacggtgcccagccactgagcaagacatgggagctcagt
ctgtacgagctgcagaggacaccacaggaagcaataactgatgggctggaaattgtggtg
tcccctcgaagtctgcacagtgaactgatgtgtcccatttgcctggacatgctgaagaac
acaatgacaacaaaggaatgtttgcatcgattttgtgctgactgcatcataacagccctc
agaagtggaaacaaagagtgccctacttgtaggaagaaactagtttccaaaagatcacta
cggccagatccgaactttgacgctctgataagcaaaatctatccaagtcgggatgagtat
gaagctcaccaggagagagtattagccaggattaataagcataacaaccagcaggctctt
agtcacagtattgaggaaggattgaagatacaagccctgaacaggttaccaagaggtaag
aagccacaggtagaaaacggaagtggagccgaagacaatgcggacagttcccactgcagt
aacgcttctgtccatagtaaccaggaagcagggcccagtaacaagaggaccaaaacttca
gatgattcagggctagagctggacacaaacaatgagactgtatccatggattctgttttg
gaaggaggcagtgagattgagttggtctttagacctcacccaacactgatggaaaaagat
gacagtgcacagactcgattcataaagacttcaggcaatgccacagtggatcacttatca
aaatatttagctgtgaggttggccttagaagaatttcgaagcaaaggagagaacaatgag
atgagcctcaatgctgcgagtgagaaacagtacactatatacattgctacagcaaacgga
caattcactgtgctgaatggttcattttccttggaactagtcagtgagaaatactggaag
gtaaacaaaccaatggaattatactacgcacccaccaaggagcacaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (38)   

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