KEGG   Xenopus laevis (African clawed frog): 108716657
Entry
108716657         CDS       T01010                                 
Symbol
riox1.L
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    108716657 (riox1.L)
   03036 Chromosome and associated proteins [BR:xla03036]
    108716657 (riox1.L)
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108716657 (riox1.L)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     108716657 (riox1.L)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     108716657 (riox1.L)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    108716657 (riox1.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108716657 (riox1.L)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1
Other DBs
NCBI-GeneID: 108716657
NCBI-ProteinID: XP_018118444
Xenbase: XB-GENE-17335443
UniProt: A0A974HJK2 A0A1L8G801
Position
5L:complement(42820998..42845089)
AA seq 590 aa
MPVPLLPERAVVMEAPRVSALAAFRHLQQESLQQTQVLKKDKHDRPKLSQKNKLVKKKRR
LSESVKEGNARNSTAIEHQNGLQDDCSNSITKKEKTPTKKAKKLRIAAENENITSNQLEG
SRISGKPHTGPPLNTVLQDLGKIHNSKARAASLFEWLISPLAPADFFRDVWEQKPVLIKR
HNHEYYDGLFSTKEFDRILREDNVQFGVNLDVTSYTDGNRETHNPPGRALPLVVWDYFKN
GCSLRLLNPQSFCGPVWNVLSVLQELFGSMVGANTYLTPADTQGFAPHYDDIEAFIVQLE
GKKHWRVYSPRNSSEFLPQFSSVNFRDRDIGEPILETVLEAGDLLYFPRGFIHQGDCLPD
AHSLHITISSYQRNSWADLLEKILPAALQVAVEEDVEFRKGLPLDYLDYMGVQNTDLEDP
RRGTFIQQVQSLVKKLAGYAPVDAAVDQKAKNFLHDCLPPVLTPVEKSHSVHGAPVMWDN
GQVKDDTIELEADTKIRLLRGGIARLCSEGDACLLYFSSNNSRIYHREEPKYMEIAAEHV
EAIEYLIHSYPKYVPVGSLPCDQEEDKLTLATILFEKGLVTTREQLKPLR
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgccagtgcccttacttccggagagagctgtggttatggaggccccacgtgtgtcagct
ctggctgctttcagacatctgcagcaggaatcattgcaacagacacaggtattgaagaag
gacaagcatgatcggccaaagctatcacagaagaacaaactggtaaaaaagaaaaggaga
ttatccgagtcggtgaaggaggggaatgcacgtaacagtactgctattgagcatcaaaat
ggactacaggatgattgcagtaattctatcacaaaaaaggaaaaaacaccaaccaaaaag
gcaaaaaaactgaggatagctgcagaaaatgaaaacattacatcaaatcagttggagggt
tcgaggatcagtggcaaaccacatacaggacctccacttaatactgtactgcaggatctg
ggcaagatccataacagcaaggcaagagcagcctccttgtttgaatggctgatttcacct
cttgcaccagctgatttcttcagggatgtttgggagcagaagccggttctaattaagcga
cacaaccacgaatattatgatggattattttccactaaggaatttgacaggattctcaga
gaagataatgttcagttcggtgttaacctggatgtgactagctatactgatggcaaccgt
gagacccacaatcctccgggacgagctttgcccctagttgtctgggactatttcaagaat
ggttgttctctcaggctgttaaacccccagtcattctgtggcccagtgtggaacgtctta
tcagtcttgcaagagctctttggtagcatggtcggggcaaacacgtacttgacacccgca
gatacgcagggctttgcaccccattatgatgacattgaagcatttattgtacaactggag
gggaagaagcactggagggtatacagtcccaggaacagctctgagtttcttccacagttc
tcaagtgtgaacttcagagacagagatattggagagcccattctggagactgtgcttgaa
gctggagatctcctgtactttccaagaggatttattcaccagggggactgtctgccggat
gcacattctttacatataaccatctcttcttatcagcgcaacagctgggcagatctcttg
gaaaagattctccctgcggcactgcaggttgccgtggaagaagatgtagaattccgaaag
gggctccctctcgattacctggattacatgggagtacaaaacactgacttggaagatcca
cggagaggcacatttattcagcaggttcagtcactggtgaagaaattggctggctatgca
ccggttgatgcagctgtagaccagaaggcgaagaatttccttcacgactgcctcccacct
gttctgacacccgttgagaagtctcacagtgtacacggagcaccagtcatgtgggacaat
ggacaagttaaagatgacaccatagagttagaagcagacacaaaaatacgccttctacgg
ggaggcattgcaagattgtgtagtgaaggagatgcctgcctgttatatttctcttccaac
aactccaggatataccacagggaggagccaaagtacatggagatagctgctgagcatgtg
gaggcaatagagtatctaatccattcttaccccaaatatgtgcctgtgggaagtctgccc
tgtgatcaagaggaagataagcttactctggcgactatcctgtttgagaaaggccttgtg
actaccagagaacagcttaagccactgcggtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (3)   
   KEGG ENZYME (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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