KEGG   Xenopus laevis (African clawed frog): 108718824
Entry
108718824         CDS       T01010                                 
Symbol
itga8.L
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04510  Focal adhesion
xla04512  ECM-receptor interaction
xla04514  Cell adhesion molecules
xla04810  Regulation of actin cytoskeleton
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108718824 (itga8.L)
   04514 Cell adhesion molecules
    108718824 (itga8.L)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108718824 (itga8.L)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108718824 (itga8.L)
   04810 Regulation of actin cytoskeleton
    108718824 (itga8.L)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xla04515]
    108718824 (itga8.L)
Cell adhesion molecules [BR:xla04515]
 Integrins
  Integrin alpha subunits
   108718824 (itga8.L)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 108718824
NCBI-ProteinID: XP_018122789
Xenbase: XB-GENE-17341744
UniProt: A0A974CLN6 A0A1L8FVP9
Position
6L:complement(29391367..29518175)
AA seq 1060 aa
MLSHWRPRGRASADRFPGLPVFLLLLMMRSPVCSAFNLDVEKVTVYSGPPDSYFGFSVDF
YLPDSSKSSVLIGAPKANTSQPQIVEGGAVYYCPFPDTPATGCKQIPFDITNNRNIRLNG
TKQPVEFKSNQWFGATVRAHKEKVVACAPLYHWRSVKPVSEKDPVGTCYVAIQNFSAYAE
YSPCRSDLADPAGQGFCQAGFSLDFYKNGDLALGGPGSFYWQGQVFTASIADIIKDYSFR
SIVRKITGEKQTEMAQSAYDDSYLGYSVAVGEFTGDSEQEVVAGVPRGAQNFGYVSIINS
SDMTIIQNFTGDQMASYFGYTVAVSDVNNDGLDDILVGAPLFMDREFESNPREVGKVYLY
LQESALEFRGPQILKGTEVFGRFGSAIAHLGDLNQDGYNDIAVGSPFAGEDRKGRVFIYN
GNDNGLNTDASQILEGAWASQSMPAGFGFTLRGDSDIDKNDYPDLIVGAFGAGKAVVYRA
RPVITVDAQLLLHPTILNPENKTCQLPNTEFLVTCFTVRVCVTVSGQSIPSNIVLKADLE
LDWLKQKGAVKRTLFMESHQAHNSFDLTIKKQRLPQCLGFLVYLREESEFRDKLTPISVN
LNYSLDESAYLGDQELKPILNRYKEATIQEQAHILVDCGEDNMCIPDLKLSARPDKNQLV
IGEENHILFLINTRNQGEGAYEAELHMIIPPEADYVGIERNMEGLRQLNCEYKMENESRL
VVCDLGNPMVAGTNLSVGLRFVVQRLETVDAITFDLYMKSSNKDNPNSNYVSLQINITAV
AQVEIRGVSHPPQIILPIPNWEPKEKPTEEKEVGPLVQHIYELHNIGPSAISETELSVGW
PSQSRDEFLLYVFHIQTEGPLKCQARGAINTLHIKPSEPEDTPELAAFLRNISVSHAVSR
RDVAVAEALRHVPTPTKLLNCTNVNCLTISCKVGHLDGGQRAVVKIRSRLWAPTFLQRKN
DYYSLIANVSFEVKKMPYSIQPAKLPSASIPIKTSVIWATPNISFAIPLWVIILAILLGL
LVLAILTLAMWKCGFFDRARPPQDDVADDTQQLTNKTAEA
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgctcagccactggcgcccccggggtcgcgcttcagccgaccgatttcccggattaccc
gtgttcttgctgcttctgatgatgcggagtcccgtgtgctctgcctttaacttggatgta
gagaaagtgacagtttacagcggccccccggacagttactttggattctctgtggacttc
tacttgcccgactcctccaaatctagtgttcttattggagctcccaaagccaatacttcc
cagccgcagatagtggaaggaggagctgtgtattactgtcccttccctgataccccggct
actggatgcaagcagattccatttgatattacaaacaacagaaacatcaggttaaatgga
accaaacagccagttgaattcaagtcgaaccagtggtttggtgcaacagtccgggctcat
aaggaaaaagttgtggcttgtgccccattgtatcactggagaagtgttaagcccgtctca
gaaaaggatcctgttggcacttgctacgttgccattcagaacttcagtgcttatgccgaa
tactctccttgccgaagtgaccttgctgatcctgcaggacaaggcttctgccaagctggc
ttcagtctggatttttataagaatggagacctggcattgggaggacctggtagtttttac
tggcaaggacaagtctttacagccagtatagcagacataattaaagactattccttcagg
agcattgtaaggaagataacgggcgagaaacaaacagaaatggcacaatctgcctatgac
gacagctacttgggatactctgtggcggtcggagaatttactggcgattccgagcaagag
gtggtggctggagttccaaggggagcacagaactttggatatgtctctatcattaattca
tctgacatgaccatcattcagaactttacaggtgatcagatggcctcctactttggatac
actgttgctgtgtcagatgtaaacaatgacggtttggatgatatcttagttggagcccca
cttttcatggatcgggaatttgagagcaacccaagggaagttggaaaagtctacttgtac
ctgcaagaaagcgctctggaatttagaggccctcaaatactgaaaggcacagaagtcttt
gggagatttggtagcgctattgcacatttaggtgatctaaatcaagatggatacaatgac
attgcggttggctcaccatttgcgggggaagacagaaaaggcagagtgtttatctacaat
gggaacgacaatgggttaaacacagatgcctcccagattctggaaggagcttgggcctca
cagtcaatgcctgcaggatttggctttacgctgagaggcgattcagacatagacaaaaac
gattacccagatcttattgtaggagcttttggagcaggaaaagctgttgtctatagggcg
agaccagtaatcactgtcgatgctcagctattgctccatcctacgattctgaacccagag
aataaaacctgccagctccccaatactgaatttctggtgacttgtttcactgtaagagtc
tgtgtaactgtgtctggacaaagcatcccctcaaatattgttttgaaagctgaccttgaa
ctggattggttaaaacagaaaggtgctgtgaaaagaacactttttatggaatcccaccag
gcccacaattcttttgatctgaccattaaaaaacaaagactaccccagtgcttgggcttc
cttgtttatctcagagaagaaagtgaattccgtgataaactcactccaatcagtgtcaac
ttaaattacagtttggatgagtcagcttatctgggtgaccaggaattgaaaccaatcctc
aatcgttacaaggaagcaaccattcaagagcaggcacacattctggtggactgcggagaa
gacaatatgtgcattcctgatctcaagctctcggccagaccggacaagaatcagcttgtc
attggagaagagaatcatattctgttcctcataaacacaagaaaccaaggggaaggagct
tatgaagctgagctgcatatgattatcccaccagaagctgattatgttggaattgagcgc
aatatggagggacttcggcaactcaactgtgaatataaaatggaaaacgaatctcgactg
gtggtgtgcgatcttggcaaccctatggtggctggaacaaatctgtcggttggtctgagg
ttcgtggtgcagcgattagaaactgtagatgccataacatttgatctctacatgaaaagt
tccaacaaggacaatccgaacagtaactatgtcagcttgcaaattaacataactgctgtg
gcccaagtagaaattagaggagtgtcccacccccctcagatcattctacccattcctaac
tgggagccgaaggaaaaaccaaccgaagaaaaggaagtcgggccattagtgcagcatata
tacgagctgcataacattgggccgagtgctataagtgaaacagagctgagcgtgggatgg
ccttcccaaagtcgagatgagttcctcctctatgtatttcacattcagaccgagggtccc
ctgaagtgccaggcaagaggcgccattaacaccttacatataaagccaagtgaacccgaa
gatacacctgagcttgctgcttttctgagaaatatcagtgtatctcatgcagtgagtcgc
cgggatgtggctgtggcagaggctttgaggcacgtccctacaccaacaaaactactgaat
tgcaccaatgtgaattgtttaacgatatcctgcaaagtcgggcacttggatggaggtcag
cgagcggtggtaaaaatccggtctcgtctatgggctccaacattcttacagaggaaaaat
gattattactcacttattgccaatgtttcgtttgaagtcaagaagatgccttatagcatt
caaccagccaaacttccatcagcatccataccgataaaaacgtctgtgatctgggccact
ccaaatatctcatttgctatccctctttgggtcatcatattggctattctccttggttta
ctagttcttgccattctgacactggctatgtggaagtgcggtttctttgacagagcgagg
cccccacaggatgacgttgcagatgacactcaacagttaacaaacaagacagcagaagca
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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