KEGG   Xenopus laevis (African clawed frog): 108719434
Entry
108719434         CDS       T01010                                 
Name
(RefSeq) collagen alpha-1(XXII) chain
  KO
K16630  collagen type XXII alpha
Organism
xla  Xenopus laevis (African clawed frog)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 108719434
NCBI-ProteinID: XP_018123773
UniProt: A0A974CQP9 A0A1L8G028
Position
6L:complement(157130172..157295402)
AA seq 1620 aa
MPRTKVYQISPLALLLFLLACSGGNAQVQRAGCKNVHYDLVFILDTSSSVGKEDFEKVRQ
WVANLVDTFEIEPDKTRVGVVRYSGKPYTEFDLGRYQTLEDVKEAARNIKYYGGNTNTGD
ALQYITTYSFSEEAGGRPRDRAIKKVAILLTDGRSQDLVLEPATAAHKAGIRIFAVGVGE
ALKEELDEIASDPKSAHVFHVSDYNAIDKIRGILRRRLCENVLCPNVRIEGERFKHKNGE
RDEIPGFDLMDLFRVKEMFGMKENGVQSSYIRLGTMPIVQQTEDIFPQGLPDEYAFVTTF
RFRKTSRREDWYIWQIIDKYGIPQVSLRLDGENKALEYSSVGVTKDAVKASFRGSQVSEL
FDRNWHKIAMSVQSNTVSLYIDCKLVMTVPIEERENIDIQGKTVIGKRLYDSVPIEFDLQ
RIVIYCDSRHAELETCCDIPNGPCVITVVTEPPLIVPTPTPAEQRVTQNILNCSHCPYGG
KGEIGLPGPEGPMGPKGEEGRAGALGLKGEKGEPGRILAAKGEKGEQGETGKQGVSGIRG
EKGEKGSIGLSGAFGREGAKGERGDRGEKGETGIAGPPGLQGLEGPRGPSGTSGPVGSPG
LQGERGEKGSRGEKGEHGIDGFPGKMGPEGREGPKGSTGLPGAHGHKGERGEKGEAGPPG
LPGNAVQIEGLKGEQGIPGPRGPQGLMGPPGTSGPEGPKGSTGLPGLEGQRGQKGEDGLA
GIDGLTGVEGPPGPAGVAGPPGPPGPQGLPGEIGFPGKPGKIGLTGLPGKHGADGVSGPI
GPKGEQGERGLDGFPGKIGIKGESGEQGRTGPAGEKGEAGPPGLQGADGRRGDKGDQGEK
GSAGQAGFKGGKGDKGAVGPPGLPGTAHTVDPVTGEPGLPGLPGEKGEKGEQGEPGEPGQ
KGESGKEGPVGPIGPKGLGGQDGMKGELGPRGDIGPQGPAGPPGLRGLPGNVGSPGDTGL
PGKDGQKGEKGEVGKEGKVGSPGPPGEAGLAGIPGLPGKGKNGEPGERGDPGPSGPTGLK
GERGAAGVPGQPGNRGPPGIGIDGSQGPAGPPGEKGVQGIRGMGGPPGPQGPPGQDGFPG
NPGERGLPGEPGLASAISLGELNLKDICKDCPPGPPGLPGMPGYKGDKGLRGSPGRDGID
GKKGEPGIMGPPGPTGLDGMKGGKGDRGTYGEPGQKGEQGIPGRPGFNGPPGVVGPPGAD
GLPGPIGPPGSPGNNGKEGPLGPQGPPGLPGLPGIAGKDGKDGKPGSPGETGKQGEPGIP
GREGTRGLPGFKGHRGDAGPPGARGEPGAAGSPGREGSSGKDGDQGPPGPQGPRGIRGPP
GKNGQPGPPGTSGVPGSPGPKGSNGDTGSAGMPGFQGPKGPRGEPGESGLPGKEGPTGKA
GDRGSKGDRGDAGIKGDKGMQGEKGQPGEPGPPGHKGHTGLLGPAGPPGERGPSGMPGPQ
GSPGLTGPRGDNPSLDTLRRLIQEELGKQLESKLAYLMSQMQPAHIKAAQGRPGPPGVSG
KDGHDGRPGPPGEPGIPGLMGSEGPAGPMGPKGDRGLKGERGEPGVGKRGDTGPPGAPGL
AGEPGYAKDGLPGTSGPQGEPGLPGSAGPQGPPGQNGQCDPSQCAYYASLASRPGNVKGP
NT seq 4863 nt   +upstreamnt  +downstreamnt
atgccacgtacaaaagtttatcagatatctccgttagcgcttctacttttccttttagcg
tgcagtggaggcaacgcccaagtgcaaagggcaggctgtaagaatgttcactatgacttg
gtcttcatcttggacacctcttcaagtgtaggcaaagaagactttgaaaaggttcggcag
tgggtagcaaatttagtggatacctttgaaattgaaccagataagacccgcgtgggagtt
gtgcggtacagtgggaaaccttacactgagtttgatctgggaagataccagactctggag
gatgtgaaagaagctgcacgaaatataaaatattatggaggaaacaccaacactggggac
gcacttcaatatataacaacgtacagtttctctgaagaggccggtgggaggcctagggac
agggcaattaaaaaagtagccatactcttgacagatggacggagccaagatctggtgctg
gaaccagccaccgctgctcataaagcaggaatcaggatatttgccgtaggagttggagaa
gctctgaaagaagaactggatgagattgcctccgatcccaaatcagctcacgtcttccac
gtgtcagactacaacgctattgataagatcagaggaattttgagaagaaggctctgtgaa
aatgtcctttgtccaaacgttaggatcgaaggagaacgattcaaacacaaaaatggcgaa
agagatgaaattccaggttttgacctcatggaccttttccgcgtgaaagagatgttcgga
atgaaggaaaacggagtgcagagttcttatatccgacttggaaccatgcccatcgtgcag
cagactgaggacatatttccacaaggacttcccgatgaatatgcctttgtaaccaccttc
agattcagaaagacttccaggagagaggactggtatatatggcaaattattgacaaatat
ggaatcccacaggtgtctctgagactggacggggaaaataaagctttggaatacagttct
gtcggcgtcaccaaggacgcggtgaaggcaagctttcgtggatcacaagttagtgagttg
tttgaccgaaactggcacaagatagccatgagtgtccagtccaacacggtttcgctttat
atcgactgcaaacttgtcatgactgtccccatcgaagagagagaaaatatcgacattcaa
ggaaagactgtgattggaaaacgcctttatgacagtgttcctattgaatttgatcttcag
cgaatcgttatatactgtgattctcgacatgctgaactggagacttgctgtgacattccc
aatgggccttgtgtaatcactgtagtcacggaaccgccccttattgtgccaacgcccaca
cccgccgaacagagggtcacgcaaaacattctcaactgctctcactgcccgtatggagga
aagggtgaaataggtttaccaggtccagaaggtccaatgggaccaaagggagaagaaggc
agggcaggagccctaggactgaaaggagagaaaggggagcctggaaggattcttgcagca
aaaggcgaaaaaggagaacagggagagacaggaaaacaaggggtttctggaatcagagga
gaaaaaggagagaagggatctattggtttatctggggcttttggaagagaaggggccaaa
ggagagagaggagacaggggtgagaagggtgaaaccggcattgcaggcccccctgggctt
cagggattagaaggaccaagaggaccatctggaacttctggcccagtcgggtctcctgga
ttgcaaggggaaagaggagagaagggctccagaggggagaagggtgaacatggaatagat
gggtttcctggaaagatgggcccagaagggagagagggtcctaagggcagcactgggtta
ccaggtgcacatggacataaaggagaaaggggtgaaaaaggagaagctggacctccagga
ctgccaggcaatgctgtgcagattgaaggcctaaagggagaacaaggaattcctgggccc
cgtggtccacaaggtcttatggggccacctggaacttcaggaccagagggcccaaaagga
agcaccggactcccaggtcttgaagggcagaggggtcaaaaaggagaagacggtttggca
ggaattgatggtctaactggagttgagggcccccctggacctgctggtgttgctggacca
ccaggacctcctggtcctcagggactgcctggagaaatcggatttcctgggaaaccgggg
aaaatagggctcactgggttacctggaaaacatggagccgatggagtctctggacctata
ggtcctaagggagaacagggagagagaggtttggacgggtttccaggcaaaatcggaatc
aagggagaaagtggagagcaaggccggactggacctgctggtgaaaagggagaagcaggc
ccaccaggacttcaaggagctgatggacgaagaggcgacaaaggggatcagggagaaaag
ggaagtgctggacaagctggatttaaaggaggaaaaggagataagggtgcggttggacct
cctggtttgcctggcacagcacatacggtagatcctgtgacaggagagcctggacttcca
ggtctcccaggggagaagggtgaaaagggagaacaaggagaacctggagagcctggtcag
aaaggagaatctggaaaagaaggtccagtggggcctatagggccaaagggcttgggagga
caagatggaatgaaaggagaactgggcccaagaggagacattggcccacaaggacccgcc
ggccccccaggactgagaggattgccaggaaacgtggggagcccaggggacactggcttg
ccaggaaaagatggtcagaaaggtgaaaagggagaagttgggaaagaaggaaaggttggt
tcaccaggacctccaggggaagcaggtctcgcaggcataccaggtcttccaggcaaagga
aaaaatggagaaccaggagaacgcggtgacccagggccatctggacctactggcttaaag
ggtgagagaggggctgcgggtgtcccggggcaacctggtaacagggggccccctgggatc
ggaattgatggatcacaaggaccagccggccctcccggagagaaaggagttcagggcata
aggggcatgggaggacctccaggtcctcagggacctcctggacaagatggttttccagga
aacccaggggaacgaggacttcccggagagccaggcctggcctcagcaatttctctagga
gaactaaatttgaaggacatctgcaaggactgcccaccggggccccctggacttcctgga
atgccaggatataaaggagacaaaggtcttcggggatcaccaggaagggacggcattgat
ggcaaaaagggtgaacctggcattatgggtcctccaggtccaacgggattggatggaatg
aaggggggtaaaggagatagaggaacttatggggaaccaggacaaaaaggagaacaggga
ataccaggaaggcctggctttaatggaccccccggtgttgttggcccacctggagcagat
ggtcttccaggaccaataggcccaccaggatctccaggaaataatggtaaagaaggtcca
ctaggtccccaaggacctccagggctaccaggacttccaggcattgctgggaaggatgga
aaggacgggaaaccaggatctcctggagaaacaggcaaacaaggagaacctggtatccca
ggccgagaaggaaccagagggttacctggtttcaagggacacagaggagatgctgggcca
ccaggtgccagaggggaaccgggtgcagctggatctccaggacgagaagggagttcagga
aaggatggtgatcaaggacctccagggcctcagggaccaagagggattcgaggaccacct
ggtaaaaatggacagcccggcccaccagggacctccggtgttccagggagtcctggcccc
aagggaagcaacggagacactggcagtgcaggaatgccgggatttcaaggacctaaagga
ccaaggggagaacctggagaaagtggcctaccaggaaaagagggcccaaccggaaaagct
ggtgaccgaggatccaaaggagaccgaggagatgctggcattaaaggagataaggggatg
caaggagaaaaaggtcaacctggagaacctggtccacccggacataaaggtcacactgga
ttactagggccagcaggaccaccaggagaaagaggcccatctgggatgccaggtccacag
gggtcaccaggattaactggtccaaggggagacaacccgtcactggatactctacgaagg
ctcatccaagaagaactaggaaaacagctggagagtaaactagcctacctcatgtctcag
atgcaaccagcacatatcaaagctgcacaaggcagacctggacctccaggtgtttctgga
aaagatggacatgatggtcgtcctggtcctcccggggagccaggaataccaggcctaatg
ggaagcgaaggaccggcaggaccaatgggtccaaaaggtgacaggggcctcaaaggggag
agaggggaacccggagttggaaagaggggagacactggcccaccgggagcaccaggtctt
gcgggtgagccaggatatgctaaagacggtctaccaggaacctcaggacctcaaggagaa
ccaggattaccaggttctgctggacctcaaggaccaccgggtcaaaatggacaatgtgat
ccatcacagtgtgcctactatgcaagtcttgcttcaagacctggcaatgtcaagggacct
taa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (84)   

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