KEGG   Xenopus laevis (African clawed frog): 108719916
Entry
108719916         CDS       T01010                                 
Symbol
snx13.S
Name
(RefSeq) sorting nexin-13
  KO
K17925  sorting nexin-13
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xla04990]
    108719916 (snx13.S)
Domain-containing proteins not elsewhere classified [BR:xla04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   108719916 (snx13.S)
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C
Other DBs
NCBI-GeneID: 108719916
NCBI-ProteinID: XP_018124700
Xenbase: XB-GENE-6487661
UniProt: A0A974HDM4 A0A1L8FR40
Position
6S:complement(30428014..30501857)
AA seq 977 aa
MIPKEPCLDEKNKKEDVARCILKASLSIWGWGSLGVVLFLIKFGPFAIFYFAFYILCFVG
GGFVVTILFGKTSSERYLERCEHSFLPSTSTGIPKCLEEMKREPRTIKIDRRITGASMID
EPLQQVIQFSLRDYVQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEIDWQPYFTTRL
VDDFATHLRVFRKAQQKMAEKEDQMKGTDKAEAFIDTFFEVEVDMQKCVCRDLVCTSSKD
EEGCLKDLCEVLLYLLLPPGDFQNKIMRYIVREILSRGILLPLINQLSDPDYINQYIIWM
IHDFSCNYEAFMNVIKLSDNIGELEAVRDKATEELQYLRSLDTVGDDINTIKNQINSLLF
VKKVCETRKQRLQSGKEIDTVKLAANFGKLCTVPLDRILIDNVALQFFMDFMQQTGGQSH
LFFWLTVEGYRVTAQQQLEVLHSRQRDGKHQANQTKGLLRAAAVGVYEQYLSEQASPRVH
VDDYLLAKLEETLSSENPTPEIFDDIQRKVYDMMLRNERFYPSFRQNTLYIRMLAELDML
KEPSFKGSDDGDGESFNGSPNGSIHSSLDDLTSSDELLQINAFISDTGVCNEHGKTYALY
TITVQRRSLEAVEDMWKTYRRYSDFHDFHMRITEQFENLASLLKLPGKKTFNNMDKEFLE
KRRNDLNAYLQLLLNPEIVKACPALVHYVFDFLENKAYSKGKRDFARKMDTFVNPLRNSM
RNVSNAVKSIPDSFAEGMNKMSDNMGKMSEKIGQDIKHSFFKAPILVPKTDAFPEHYRVS
AQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDH
VQYMTSPDQVADYVKQFRESFWPNGILAESVLLRDRSIRMRTRVAAKTKLLEIMPDELKH
IIGAETTRKGILRVFEMFQYNQLNRRLVYVFLEGFLETLFPQYKFRELFYKLHSRSERMQ
KYRQRPQPSQTPSLQKR
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgatcccaaaggagccttgtcttgatgaaaagaataaaaaagaggatgtagccagatgc
attttaaaggccagtctttccatatggggatgggggagtcttggcgttgtgctgttcctg
atcaagtttggaccttttgctatattctactttgccttttacatactatgctttgttgga
gggggttttgtggtgactatcctttttggcaaaaccagttcagaacgatacttagaaagg
tgtgagcactcatttctaccatcaacatctactggcattcctaagtgtttggaagaaatg
aaacgtgaacctagaaccattaagattgacagaagaataacaggtgctagtatgattgat
gagcccctgcaacaggttatacagttttcattgagggattatgtccagtactggtattac
acactaagtgaggatgaatcgtttctccttgaaatcaggcaaactgtccaaaatgcgctt
gtacagttttctactaggtcaaaagaaattgactggcagccttattttaccacccgttta
gtggatgactttgccactcatcttagagtgttcagaaaagcgcaacaaaaaatggcagaa
aaggaggatcaaatgaaaggtacagataaagctgaagcttttatagatactttttttgag
gttgaagttgacatgcaaaaatgtgtctgccgtgaccttgtctgcacttcatccaaagac
gaggaagggtgcctaaaggatttatgtgaagttttactgtatttattgctacctcctgga
gacttccagaataaaatcatgcgatatattgtgagggaaatcctttcacgaggaattctt
cttcctttaataaaccagctcagtgatcctgattatattaatcaatatatcatttggatg
attcatgatttcagttgcaactatgaggcctttatgaatgttattaaattaagtgacaat
ataggagaattggaagctgtgagagacaaagctacagaagaactgcagtatcttcgttct
ttggatactgttggagatgatatcaacactataaaaaatcagataaacagcttactcttt
gtaaagaaagtttgtgaaacaagaaaacagagattgcagtcgggaaaagaaattgacact
gtgaagttggctgcaaactttggaaaactttgcacagtccccttggacagaattcttata
gacaacgttgcactacagttttttatggattttatgcagcagaccggagggcaatcacat
ctcttcttctggctgacggttgaaggataccgggtcacagcgcagcagcaacttgaagtt
ctgcacagccgacaaagggatggaaagcatcaagccaaccaaacaaaaggcttgctaaga
gctgcagcagttggagtgtatgaacagtatttatctgagcaggcatcacctagagtccac
gttgatgactacttattagcaaagcttgaagagaccttgagcagcgagaacccaacacct
gagatttttgatgacatacagagaaaggtttacgacatgatgctgcgcaatgaaagattt
tacccatcgttccggcagaacactctctatatccgaatgctggcagagctcgacatgtta
aaggagccaagttttaaagggtcagatgatggagatggagaatctttcaacgggtcgcct
aatggcagtatacattcgtctctagatgacctgaccagctcagatgagctattgcagatc
aatgcttttatttctgacactggagtgtgtaatgaacatggcaaaacctatgcactgtac
accatcactgtccagcgaagaagcttagaagccgttgaagacatgtggaaaacatatcgc
cgttacagtgactttcacgacttccacatgcgaatcacggaacagtttgagaacctcgca
agccttttgaagctgcctgggaagaagacgtttaacaatatggataaagaatttctagaa
aaacggagaaacgatttaaatgcgtatttacagctgctactgaatccagagatagtgaaa
gcgtgccctgcacttgttcattatgtatttgactttcttgagaacaaagcctatagtaag
gggaaaagagactttgcaaggaagatggatacatttgtcaatcctctgaggaactcaatg
aggaacgtctccaatgcggttaagtcaattcctgatagtttcgctgaaggaatgaataaa
atgtccgataacatggggaaaatgtcagaaaaaattggacaagatataaaacactccttc
tttaaggctccaattcttgtaccaaaaacggatgcatttccagaacactacagagtatcg
gcacaactggacgacaatgtggatgacaatattccgttacgagtgatgcttcttctaatg
gatgaagtttttgacttgaaagaaaggaatcagtggttaagaagacaaattacaagcctt
ctccagcagctcataagagcaacctatggagacaccattaatagaaaaattgttgatcat
gtgcagtatatgacctccccagaccaagtagcagattatgtgaaacagttcagagaatca
ttttggcccaatggaatattggcggaatcagttctactcagagaccgaagtattcgaatg
agaactagagtggcagcaaagaccaagctgttggaaataatgccagatgaactgaagcat
atcattggtgctgaaacaactcggaaaggcatcctgcgggtgtttgaaatgtttcagtac
aaccagctgaacaggagacttgtgtacgtttttttagagggcttcctggaaaccttattt
ccacagtataagttccgtgagcttttctataaactccattctcgatcagagcgcatgcaa
aaatatagacagagaccacagccttctcaaacgccttctttgcagaaaaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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