KEGG   Xenopus laevis (African clawed frog): 379279
Entry
379279            CDS       T01010                                 
Symbol
rcl1.L, rcl1
Name
(RefSeq) RNA terminal phosphate cyclase-like 1 L homeolog
  KO
K11108  RNA 3'-terminal phosphate cyclase-like protein
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    379279 (rcl1.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    379279 (rcl1.L)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    379279 (rcl1.L)
SSDB
Motif
Pfam: RTC RTC_insert
Other DBs
NCBI-GeneID: 379279
NCBI-ProteinID: NP_001079592
Xenbase: XB-GENE-962714
UniProt: Q7ZXF0 A0A974E1V0
Position
1L:complement(137696747..137721310)
AA seq 372 aa
MASKGNCLRYEGCNFFRQRIVLSTLSGRPVKIQGIRVKDESPGIRDFEASFIRLMDKITN
GTRIEINETGTSLYYQPGLLSGGTLEHDCNILRSIGYYLESLFCLAPFMKHPLKITLRGV
TNDQVDPSVDTLKATAIPLLKRFGIDGEHFELKVLKRGMPPGGGGEVIFSCPVRKLLRPV
QLTDPGKIKRIRGVAYSVRVSPQIGNRIVDAARGVLNRFLPDIYIHTDHLKGANSGKSPG
FGLSLVAETTEGCFLSAELASNPQGEGSTVLPEDLGRNCAMLLLEEIYRGGCVDSVNQSL
VLLLMTLGQQDVSKVLLGPLSPYTIQFLRHLRSYFQIMFKMESKTFEEQKGAEKVLLTCV
GAGFSNLSKPVK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcgagcaaagggaactgccttcgctacgagggttgcaacttcttcagacagaggatc
gttctgtctactctgagtggaaggccagtaaagatccagggcattcgagttaaagacgag
agcccaggaatcagggattttgaagcaagtttcatcagactaatggataaaataacaaac
ggcacgaggatcgagatcaacgaaactggtacctctctgtactatcagcccgggcttctc
tctggaggaaccttggagcatgactgcaatatactgcgctctatcggctattatttagaa
agtctcttttgcctagctccttttatgaagcacccattgaaaatcaccctacgtggagtc
actaatgatcaagtggacccctctgtcgacacactgaaggctacagctattccattattg
aaaagatttggtatagatggtgagcattttgagctgaaggtattaaagagaggtatgccc
ccaggtggaggaggggaggtaatcttctcatgtccagtaagaaagcttttaagacctgtt
caattgaccgatcctggaaaaataaaacgcattagaggagtagcatactccgttagagtc
tctccacaaattgggaacagaatcgtagatgcagcaaggggtgttctgaatagattcctc
ccagatatttacattcacacggatcacctgaaaggagccaattcaggaaagtccccagga
tttggcttgtctcttgtggcggaaacaacagagggttgctttctcagtgctgagcttgct
tccaaccctcagggtgaaggtagcacagtgcttcctgaggatttgggacgtaactgtgca
atgttgctgctggaggaaatttacaggggtggctgtgtggattcagtgaatcagagcctg
gtattgctgctcatgacccttggacagcaagatgtttccaaagtcctgctcggacctttg
tccccttacacgattcagtttctgcgccatttacggagttatttccagatcatgtttaaa
atggaaagcaagacctttgaagagcagaaaggggcagagaaggtgctgttgacctgtgtc
ggcgctggattttccaatctcagcaagcctgtgaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system