KEGG   Xenopus laevis (African clawed frog): 379908
Entry
379908            CDS       T01010                                 
Symbol
tra2a.L, tra2a
Name
(RefSeq) transformer 2 alpha homolog L homeolog
  KO
K12897  transformer-2 protein
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    379908 (tra2a.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    379908 (tra2a.L)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    379908 (tra2a.L)
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     379908 (tra2a.L)
Spliceosome [BR:xla03041]
 Common components
  Common spliceosomal components
   SR proteins
    379908 (tra2a.L)
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 379908
NCBI-ProteinID: NP_001080216
Xenbase: XB-GENE-492329
UniProt: Q7ZXH5
Position
6L:complement(41205678..41218706)
AA seq 276 aa
MSEVEGRESRSKSPAESAPRVKSESRSRSRSASRASKRSKSRSRSRSKSRSRSRRHSHRR
YSRSRSRSHSRKRRSKSRSYTPEYRRRRSRSHSPMSNRRRHNGSRANPDPNLCIGVFGLS
LYTTERDIREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHADGMELDG
RRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGSSSSSRRRDSYSDRGYDRGY
DRYDEYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq 831 nt   +upstreamnt  +downstreamnt
atgagcgaagtggagggacgagaatcacgttccaagtcaccagctgaaagtgcaccacgt
gtgaaatctgagagcagatccagatcccgtagtgcatcaagggcttccaaacgttctaaa
tcccgttcccgatccaggtccaagtcaagatccagatctagaaggcattcccacagacga
tattcccgctcacgctcccgttcccactctcgcaaaaggaggtcaaagagtaggtcctac
acaccagaatacaggcgacgaaggagccgcagtcactctcctatgtccaaccgaaggaga
cataatggcagcagggcaaacccagatcccaatctatgtattggcgtgtttggcctaagt
ttatatacaacagaaagagatataagagaagtcttttctcgttatggtccccttgctggt
gtcaatgtagtttatgatcagcgtactggaagatcaaggggctttgcctttgtctacttt
gaacgaattgaagattccagagaggctatggaacatgcagatggaatggaactggatggc
aggagaatccgggttgactactccatcacaaaaagagcacacaccccaacgccaggcata
tatatgggaagacccacccacagcggtggaggaggtggtggtggtggaggaggaggaggc
agcagcagcagcagccgccgtcgtgactcctattccgataggggatatgaccggggctat
gacagatatgatgaatacgactacaggtacaggaggcgatccccatcaccttattacagc
cgatacaggtccaggtcacgatcacgttcttacagcccaaggcgctattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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