KEGG   Xenopus laevis (African clawed frog): 379974
Entry
379974            CDS       T01010                                 
Symbol
traf7.S
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X4
  KO
K10646  E3 ubiquitin-protein ligase TRAF7 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    379974 (traf7.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     379974 (traf7.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    379974 (traf7.S)
SSDB
Motif
Pfam: WD40 NBCH_WD40 WD40_like zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-TRAF Nup160 zf-C3HC4_4 Sina_ZnF zf-C3HC4_3 zf-RING_5 DUF4164 DUF641 DUF1664 DUF4455 Filament DUF16 KxDL
Other DBs
NCBI-GeneID: 379974
NCBI-ProteinID: XP_018092722
Xenbase: XB-GENE-949629
UniProt: A0A8J0TXF2
Position
9_10S:complement(102661726..102704069)
AA seq 637 aa
METTFGPAFSAVTTITKADGTKHRRTPSSSSTLTFSPRDEDDVMPPISTPRRSDSAISIR
SLHSESTMSLRSTFSLHEEEEEPDPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRR
CALTSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCKYGCHPSSNGKPAVFEVDPHGCPFT
IKLSARKDHEGSCDYRPVRCPNNPNCPPLLKMNLEAHLKECEHIKCPHSKYGCNFIGNQD
TYETHLETCKFEGLKEFLQQTDDRFHEMQVAMTQKDQEIAFLRSMLGKLSEKIDQLEKNL
DLKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFV
GHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGSKLY
SGSADCTIIVWDIQTLLKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTDLKLK
KELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRTLECVHVLQTSGGSVYSIAVTNHHIV
CGTYENLIHVWDIESKEQMRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNM
ICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggagaccacgtttggtcctgcgttctcagcagtgacaactattaccaaagctgatgga
accaagcacagacggaccccctcctcatccagtaccctgacattttccccccgggatgaa
gatgatgttatgcctccaatcagcaccccgagacgctcggattctgccatttctatacgg
tccctgcattcggagtccaccatgtccctgaggtccacgttctcgctccatgaagaagaa
gaagagccggacccgctagtgtttgcggagcagccctcggtgaaactctgttgtcagctc
tgctgcagcgtctttaaagatcctgtcattaccacatgtgggcatacgttctgcaggagg
tgcgctctgacatctgaaaagtgtccggtggataacgccaaactaacggtggtcgtgaac
aacatcgctgttgccgagcaaataggagagcttttcattcactgtaaatatggctgccac
ccctcctccaacggcaagccggctgttttcgaagtggatcctcacggctgccccttcacc
attaaattaagtgccagaaaggaccatgaagggagctgcgattaccgaccggtccgttgt
cctaataaccccaattgtcccccgttattaaagatgaacttggaagctcatttaaaggag
tgtgaacacatcaagtgccctcattccaagtatgggtgcaactttatagggaaccaagac
acctacgagacacacctagaaacgtgcaaattcgaggggctgaaggaatttctgcagcag
acagacgatcggtttcacgaaatgcaggtggccatgacgcagaaggaccaggagattgca
tttctgcgctccatgctgggcaagctctcggagaagatcgaccagctggagaagaaccta
gacctgaaatttgatgttttggatgaaaaccagagcaagctgagcgaagacctgatggag
ttccgtagagacgcctccatgctgaatgatgaactctcccatatcaatgcccggctgaac
atgggaatcctaggatcctatgatcctcagcagatatttaagtgcaaaggcacctttgta
ggacaccagggccctgtgtggtgtctgtgcgtttactccattggagacctgctcttcagc
ggctcatcagacaaaacaataaaggtgtgggacacgtgtacgacatataagtgccaaaag
accctggaaggacatgatggcattgttcttgctctctgtattcaaggaagcaagttgtac
agcggttcagcagactgcactattattgtgtgggacattcagactctgctgaaggttaat
accattcgagcgcacgacaaccctgtttgcaccttagtgtcatcgcataatatgctgttc
agcggctccctgaaagccatcaaggtgtgggacattgtgggcacagacttgaaactgaag
aaggagcttacaggcctaaaccactgggtgcgagctcttgtggcctctcagaactacctg
tacagtgggtcctaccaaaccatcaagatttgggacatcagaacgttggaatgtgtccat
gtcctgcaaacatcaggtggcagtgtgtactccatcgcagtaaccaaccaccatatagtc
tgtgggacatacgagaaccttatacatgtctgggacattgaatccaaagagcaaatgagg
acgctgacaggacatgttgggacagtgtatgcgctggctgtcatatccacacctgatcaa
accaaggttttcagcgcctcgtatgacagatcactgcgggtgtggagtatggataacatg
atctgcacccagacgttgttgagacatcagggcagtgtcacggctctggcagtgtcgcgg
ggtcgcctcttctctggtgcagtggacagtacagtgaaggtctggacttgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (19)   
   Pfam (19)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system