KEGG T01010: 380373

Xenopus laevis (African clawed frog): 380373

Entry

380373            CDS       T01010

Symbol

cxcr4.S, cd184, CXC-R4-B, CXCR-4-B, cxcr4, cxcr4-a, cxcr4-b, fb22, hm89, hsy3rr, lap3, lcr1, lestr, npy3r, npyr, npyrl, npyy3r, xcxcr4

Name

(RefSeq) C-X-C chemokine receptor type 4-B

K04189

C-X-C chemokine receptor type 4

Organism

xla Xenopus laevis (African clawed frog)

Pathway

xla03250

Viral life cycle - HIV-1

xla03260

Virion - Human immunodeficiency virus

xla04020

Calcium signaling pathway

xla04060

Cytokine-cytokine receptor interaction

xla04144

Endocytosis

xla04672

Intestinal immune network for IgA production

xla04810

Regulation of actin cytoskeleton

Brite

KEGG Orthology (KO) [BR:xla00001]
09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    380373 (cxcr4.S)
   03260 Virion - Human immunodeficiency virus
    380373 (cxcr4.S)
09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    380373 (cxcr4.S)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    380373 (cxcr4.S)
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    380373 (cxcr4.S)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    380373 (cxcr4.S)
09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    380373 (cxcr4.S)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:xla04030]
    380373 (cxcr4.S)
   04050 Cytokine receptors [BR:xla04050]
    380373 (cxcr4.S)
   04090 CD molecules [BR:xla04090]
    380373 (cxcr4.S)
G protein-coupled receptors [BR:xla04030]
Rhodopsin family
  Chemokine
   CXC Chemokine
    380373 (cxcr4.S)
Cytokine receptors [BR:xla04050]
Chemokine receptors
  CXC Chemokine
   380373 (cxcr4.S)
CD molecules [BR:xla04090]
Proteins
  380373 (cxcr4.S)

SSDB

Motif

Pfam:

7tm_1 CXCR4_N 7TM_GPCR_Srsx

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

9_10S:complement(55126603..55130371)

AA seq 358 aa
MDGFSGGIDINIFDGNSTENGSGDFEDFIEPCFMQENSDFNRIFLPTIYSFIFLLGIIGN
GLVVVVMGYQKKSRTMTDKYRLHLSVADLLFVFTLPFWSVDAAIGWYFKEFLCKAVHVIY
TVNLYSSVLILAFISLDRYLAIVHATNSQGSRKMLADKVVYAGVWLPALLLTVPDLVFAS
VSNENGQFVCDRIYPIDNRETWTVGFRFLHITVGLILPGLIILVCYCVIISKLSHSKGHQ
KRKALKTTVILILAFFACWLPYYVCLTTDTFMMLGLVKADCIWENTLHKAISITEALAFF
HCCLNPILYAFLGAKFKKSAQNAFTSVSRGSSLKILSKKRAGLSSVSTESESSSFHSS

NT seq 1077 nt +upstreamnt +downstreamnt
atggacgggttttctggtggcattgatatcaatatttttgatggcaactccacagagaat
ggttccggtgactttgaggatttcattgagccatgtttcatgcaagaaaacagtgacttt
aacaggatcttcttgccaacaatctactccttcatcttcctgctgggcatcattgggaat
ggactggtggtggtggtcatgggctatcaaaagaaatccaggaccatgacagacaagtat
aggctgcacctttctgtcgctgacctgctttttgtgttcaccctgcccttttggtctgtg
gatgctgccattggatggtactttaaagagttcctttgtaaggctgtccatgtcatttat
actgtcaacctgtacagcagcgttctcattttggcattcatcagcctcgatcgctacttg
gccattgtccatgcgaccaacagccaaggctcacggaagatgctggcggacaaagtggtg
tacgctggcgtgtggctgccagcccttctgttgacagtgccggacttggtgtttgctagt
gtcagcaatgaaaatggtcagtttgtttgcgaccgcatttaccccattgataaccgggaa
acatggactgttgggtttagattcctgcacataactgttggccttatcttgcctggtctg
atcattctggtctgttactgtgtcatcatatcaaagctttctcattccaagggacaccag
aagcgcaaagccttaaagaccactgtcatcctcatcttggccttcttcgcctgttggctt
ccatattatgtatgcctcactaccgacacattcatgatgcttgggctggtgaaggcagac
tgcatttgggagaacaccctacacaaggccatatccatcacagaagctttagccttcttc
cactgctgccttaaccccatcctgtatgccttcctcggggccaaattcaagaagtctgct
cagaacgcattcacctcagtcagcagaggctcaagcttaaaaatattatccaaaaaacga
gccggactttcttctgtctcaacagaatccgaatcctccagttttcactcgagctaa

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