KEGG   Xenopus laevis (African clawed frog): 398700
Entry
398700            CDS       T01010                                 
Symbol
hmgxb4.S, hmg2l1, hmgxb4, xHMG2L1
Name
(RefSeq) HMG box-containing protein 4
  KO
K11298  HMG domain-containing protein 4
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    398700 (hmgxb4.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    398700 (hmgxb4.S)
SSDB
Motif
Pfam: DUF4171 HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 398700
NCBI-ProteinID: NP_001082746
Xenbase: XB-GENE-951787
UniProt: Q6WKW9
Position
4S:complement(101236121..101247525)
AA seq 553 aa
MSYRDLRECIDSERGTEDVGLAAGRSQREKKRSYKDLLREEEEIAEQVRKSSKKRSKELD
LFSGNELHKKKKKHSSDDYHADHSTDSAKKKKKTSLPSPSSSDTAMDLLKAITSPQADTS
TTHPSKKPEKILATPISFSSPSQPPHKDYHKKSGEVSGDDSSHRSKKSKPLTLREPDGLR
MKLIMSPNEKSEEEAVSPQGGPGHSDSASSKKNSKKLGREEIESRSSHKKHKKQSYTPRS
GGTPDSASSTGGELDAGELVIDDSLRDMKKKKKSKKSKKKKDKHKDEKHKKHSKSKREHE
VEQSQTQIASPGLPSPPPPPATTPPTSPPSIPLQPQALVTHTEEQSDKKKKKEDPEKPKK
KNMSAYQVFSKEYRVSIIAEHPGIDFGELSKKLAEVWKQLPEKDKLVWKQKAQYLQHKQN
KAEATTVKRKSSSSESAPKSKGSSSGLVSPNKKSPTSVASFSTSPAKVPDTEPIDVAAHL
QLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLVCLTSHVPQLNACPKQILS
NTLDNIAYVMPGL
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgtcctaccgtgatttaagagaatgcatagattcggagcgtggaacggaggatgtaggt
ttggctgctggcagaagccaaagggaaaagaagcgatcatataaagatctgctgcgtgag
gaggaggaaatcgctgaacaagtccggaagtcctccaaaaagagatccaaggaattagat
ttattttcgggaaacgaattgcacaaaaagaagaaaaagcattcttcagacgactatcat
gcagatcactctacagattctgcaaagaagaaaaagaaaacttcacttcctagtccttct
tcttcagacacggctatggatcttctgaaagccattacctctccccaagcagatacctcc
accacacacccctccaagaagccagaaaaaatcctggcgactcccatcagcttttcatcc
cccagtcagccacctcataaagactatcacaaaaaaagtggagaagtatctggggatgat
tcttcccatcgatcaaagaaatcaaaacctcttactctgcgggagccagatggcttaaga
atgaaactaattatgtctcccaatgaaaagagtgaagaagaggcagtctcaccacaaggg
ggtccaggacatagtgatagtgcatcttctaagaaaaacagtaagaaattgggaagagaa
gaaattgagagcaggtccagccacaagaaacacaaaaagcaatcctatacaccacggtct
ggtggtacgcctgattcagcatcatccactggtggagagctggacgctggggaactggtc
attgatgactctcttcgcgatatgaagaaaaagaagaaatcaaagaaaagcaaaaagaaa
aaagataaacacaaagatgagaaacacaagaaacatagcaaaagtaaacgagagcatgag
gtggagcaaagtcaaacacaaattgcctctcctgggctgccttcacctcctcctccccct
gctacaacaccaccaacttcaccaccatccatacctcttcaaccacaagcactcgttact
cacacagaagagcaatccgataagaagaagaaaaaagaggacccagagaagcccaagaag
aagaatatgtctgcttaccaggtcttttccaaagaatatcgagtcagcatcattgcagag
cacccaggaattgactttggggagctaagtaagaaacttgctgaggtttggaagcagctt
cctgaaaaagataaacttgtttggaaacaaaaggctcaatatctccagcacaagcagaac
aaagcagaggccactactgtgaaacgtaaatccagctcctctgagtctgctccaaagagc
aaaggctcatcttctggtcttgtctccccaaacaaaaagtcaccaaccagtgttgcctcc
ttctccacctctccagccaaggtccctgacacagagccaattgatgtagctgcacacttg
cagctgctaggtgaatctctgagcctgattggacaccgtcttcaggagacagagggaatg
gttgctgtgtctggcagtctgtctgtgctactggattccatcctatgtgccctgggccca
ttagtatgtctcacaagtcatgtgcctcagctgaatgcctgccccaagcaaatcctgtcg
aatacattggacaacatcgcctacgtgatgccgggcttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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