KEGG   Xenopus laevis (African clawed frog): 398705
Entry
398705            CDS       T01010                                 
Symbol
gtf2a1l.L, alf, gtf2a1l
Name
(RefSeq) TFIIA-alpha and beta-like factor
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    398705 (gtf2a1l.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    398705 (gtf2a1l.L)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     398705 (gtf2a1l.L)
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 398705
NCBI-ProteinID: NP_001082755
Xenbase: XB-GENE-972580
UniProt: Q6GMZ8
Position
5L:complement(5396857..5422036)
AA seq 472 aa
MAHSANPNPVPKLYKSIIEDVMESVREIFVEEGVDEQVLKELKQLWETKLLQSKATEGFF
QDNSTPQFVLQLPQNLHHSLHTSTGNRNVTHFATGEMGTSGSNSAFSLPAGITYPIHLPA
GMTVQTASGQLYKVTVPVMVTQAPGGPRILQPPVQQFFQHVRQPLGPSSSSQYSRNTYIE
QKWQQQPANVHSSEGLNIYDREASVEPNYQNNNDDLLIQQSVDLQDHLTNKVLNQPTHGL
EDSHLNDITGPLFSPRQMNGGLDLSSESVMNNLNMAHSMQGQPEHEYSSLLKPQDSDDVV
ELILMDNELGDKNSAGDNGNIDIPNGLPGVEKQAVPREIEIIQVDGAGDTSSDEDLGNVR
DLDENEFLGIIDTEDLKALEEDDTGSNEDSTSNSSDDEDPEIDVIEEDPLNSGDDVSEQE
VPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMSFGGKDYVFSKAIGEAEW
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcccattcggctaaccctaatcctgtgccaaagttatacaaatcaattattgaagat
gtcatggaaagtgttcgggaaatttttgtggaagaaggcgtggatgagcaagtgcttaag
gaattaaagcagttatgggagaccaagctactgcagtcgaaagctacagaaggtttcttc
caagacaacagcaccccacaatttgtcctccaactgcctcagaatttgcatcactccctt
cacacctcaacaggaaatcgaaatgttacacattttgcaacaggtgaaatgggtacttcc
ggatcaaacagtgcattttctcttccggcgggtattacttacccgattcatctgccagct
ggaatgactgtacaaactgcctctggtcaactttacaaagtaacagtgcctgtaatggtc
acccaagctcccgggggcccgagaatactccagccgccagttcagcagttctttcaacat
gtccgtcaacctttagggccctcctcaagcagccagtacagcagaaatacttacatagaa
caaaaatggcagcagcaaccggccaacgttcacagctccgaaggactaaatatatatgat
cgagaggcctctgttgaaccgaattatcagaataataatgatgatttgcttattcagcag
tccgtagatctgcaggatcatcttacaaacaaggttctgaatcagcccacgcacggcttg
gaagacagtcatttaaatgatataacaggaccgctctttagtccaaggcaaatgaatgga
ggactagatctgagctcggagtctgtgatgaataacttaaacatggctcactccatgcaa
gggcaaccggagcatgaatattcaagcctgttaaaaccacaagattctgacgatgtagtt
gagctgatacttatggataatgaacttggtgataaaaattctgctggagacaacgggaac
attgacatccctaatgggttacctggtgtggagaagcaagcagtaccccgggaaatagag
ataattcaagtagatggggccggcgacacttcctctgatgaagacctaggaaatgtgaga
gacctagatgaaaatgaatttttgggcattattgacacagaggaccttaaagctctagaa
gaggatgacactgggtcaaatgaagactcgactagtaacagtagtgatgatgaggatcca
gaaatcgatgtgattgaagaggatccattaaattctggagatgacgtgagtgagcaagaa
gtcccggatttgtttgacaccgacaatgtcattgtgtgccagtatgataagattcatcga
agcaaaaacaagtggaaattctatttaaaagatggagttatgagtttcggtggcaaagac
tacgttttttctaaagccattggagaagcggaatggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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