KEGG   Xenopus laevis (African clawed frog): 398805
Entry
398805            CDS       T01010                                 
Symbol
exd2.L, exd2, exd2-a, exdl2
Name
(RefSeq) exonuclease 3'-5' domain containing 2
  KO
K20777  exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    398805 (exd2.L)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     398805 (exd2.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     398805 (exd2.L)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RRXRR Cas_CXXC_CXXC Cytochrom_c3_2
Other DBs
NCBI-GeneID: 398805
NCBI-ProteinID: NP_001083214
Xenbase: XB-GENE-5752458
UniProt: Q6PB18 A0A8J0PSR7
Position
8L:101957515..101970519
AA seq 642 aa
MPKHAGLTLGVASLVGTTVGFLVLWKFLKNRRRRLCSAVDHRDTVVLDATGHDTNKQCTL
TKLKETPKIESDGISVVEKILVADTEIVSKADEWETVWLLLKKDLDVYPVLGMDCEWVSV
DEKASSVSLLQMASFSGFCVLVRLPQLTSSGCTIPKTLLELLANSSVLKVGVGCWEDSSK
LLNDYGLSVKGCVDIRYLAMRHRRDILQNTLSLKSLSETILSFPLDKSFQLRCSNWDVEE
LTQDQAKVSSIQPDMQTRSRTCSESHSLFQYPSAKVLYAARDAQVSVALFLHLLGFFSAD
LPCPWEPLLGKCQGLIDIPFKGKGNGISNGEVSGSLKQRKEKAGDQSTQNSQDSDPRRNK
RKQLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGDLVSAIPFIVKLRF
EPSGRPESNADYYLTIKENLCVVCGKRESYIRKNIVPHEYRRHFPVQMKDHNSHDVLLLC
TSCHAVSNYYDSNLKQKLAEEFNAPIGCEEGVRLLEDPIRRQVRSAARALLNVANLPKCR
KEELISEIKAFYNMEDVTEETIKEAAGLETRLFNETYTPHGLKVVQTFALGGLRPLMELE
KRWRQHFLDTMHPKHLPQQWSVDHNHSKLLKKYGDDLVVQLC
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcccaaacacgctgggctaactcttggtgttgcatcattggtgggtacaacagtgggg
tttcttgtcctttggaagtttcttaaaaatcgcaggagacggctttgctctgctgtagat
cacagagatacagttgttctagatgccactgggcatgatactaacaaacagtgtacatta
acaaaactgaaagaaacgcccaagatagaatctgatggcatttctgtggtcgagaagata
cttgtggcagacactgaaatagtctctaaagccgatgaatgggagactgtgtggcttttg
ctaaagaaagatcttgatgtttatcctgtactcggcatggattgtgaatgggtatctgta
gatgaaaaagccagttctgtgtctcttctgcagatggcttctttcagtggattttgtgtc
ctggttcgtttgcctcaactgacaagttcaggatgcactattccaaagaccctacttgaa
cttttggcaaacagcagtgttctaaaggttggagtgggatgctgggaagactcctctaaa
ttgttgaatgattatggcctttctgtgaaaggatgtgtagatatccgatacctggcaatg
agacataggagagatattctccagaacacgctgagcctgaagtctctctcagaaactatt
ttatcatttcctttggacaaatcttttcagcttagatgcagtaactgggatgttgaagag
ttaactcaggatcaggcaaaagtctcatccatccagccagatatgcagacccgcagtaga
acatgctcagagtcacactccttgtttcaatatcccagtgcaaaggttttgtatgctgcc
agagatgctcaggtatctgttgcccttttcctgcaccttcttgggttcttctcggctgat
ttgccctgcccatgggaaccgttgttgggaaaatgccaaggactaatagatattcccttt
aaaggaaaagggaatggtatttcgaatggtgaagtgagtggatccttaaaacagaggaaa
gagaaagctggtgatcagtcaacacaaaactctcaagacagcgatccccgcagaaacaaa
aggaagcaactgggtgtgggatattctgcaagaaagtcacctttgtatgataactgcttc
ctgcatgcccctgatggacaaccgctgtgtacctgtgataggaaaaaagctcagtggtat
ttggataaaggcatcggagacctggtgagcgccattcctttcattgtgaagctgcgattt
gagccgtctggccgcccagagtccaacgcagattattacttaacgattaaggagaacctc
tgtgtcgtatgtggaaagagggagtcctacatacggaagaacattgtgccccatgagtac
cgacgtcactttcctgttcaaatgaaggatcacaactctcacgatgtgcttctcctctgc
acttcttgccacgctgtgtctaattactatgattccaacttgaaacagaagctggctgag
gagttcaatgcccctattggctgcgaagaaggtgtacgcctgctagaagatcctatacgc
cgccaggtgcgctctgcagctagagctcttctaaatgttgcaaatctaccaaagtgccgc
aaggaggagctgatcagtgaaatcaaagctttttataatatggaggatgtcactgaagag
actataaaagaggctgctggtctggaaaccaggctattcaatgagacctatactccacat
ggactgaaagtggtgcaaacgtttgccctgggtggcctgaggcctctaatggagcttgag
aagcggtggcggcagcacttccttgacaccatgcatcccaagcatcttcctcagcagtgg
tctgtggaccataaccacagcaagcttctcaaaaaatatggtgatgatcttgttgtccaa
ctctgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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