KEGG   Xenopus laevis (African clawed frog): 398990
Entry
398990            CDS       T01010                                 
Symbol
mgrn1.S, mgrn1
Name
(RefSeq) mahogunin ring finger 1, E3 ubiquitin protein ligase S homeolog
  KO
K10604  E3 ubiquitin-protein ligase MGRN1 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04120  Ubiquitin mediated proteolysis
xla04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    398990 (mgrn1.S)
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    398990 (mgrn1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    398990 (mgrn1.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     398990 (mgrn1.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    398990 (mgrn1.S)
SSDB
Motif
Pfam: zf-C3HC4_3 zf-RING_2 Prok-RING_4 zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 398990
NCBI-ProteinID: NP_001083558
Xenbase: XB-GENE-963245
UniProt: Q6P7J2
Position
9_10S:117183648..117195002
AA seq 473 aa
MGGEKFETPHPEGYLFGENSDLNFLGNRPVQFPYLTPAPHEPVKTLRSLVNIRKDSLRLV
RYKDGADSPLEEGGNPRVLYGLEFTFDADARVAVTVYCQASEEFSGGVAVYNPRSPSLQS
QTVYYKRGLSQHFSLTSFKIDFSGWKDEELNFDLDKGIVPLVIQAVVAEGGEGSAHAHVL
LAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQDTKPSDDENSDNSNECVV
CLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICRLPFRALLQIRAVRRKPGPLPPIS
FSPVLAQSLDHDDSTGADNIPPGYEPISLLEALNGLCSPPPSAPLYEEISYSEGLPARGP
PENSHHKAKHIKSTDSGLRSPSSPIHEEDEEVSAISDSERPAVVGSLSRDSSHTESVSAA
ATPEIVSTHRGSHVQPPPEVHKDNVSDPLELKEEGTQEGTVLEPDACSIGIDE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggtggagagaagtttgagaccccacacccagaaggttatctttttggggagaacagt
gacctgaacttcctcgggaaccggcccgtgcagtttccttacctaactcctgcccctcat
gaaccagtgaagactctgcgcagcctggttaatatacgcaaggactccctgcggctggtc
agatataaagatggagctgacagccctttggaggagggagggaatccgcgtgttctgtac
ggcctggagttcactttcgatgccgatgctcgagtggcagtcactgtgtattgtcaggct
agtgaggagttctctgggggtgtcgctgtgtacaatccccgcagcccttccctgcagtca
cagaccgtgtattacaagcgcggcctaagccaacacttctctctcacctccttcaagatt
gacttctccggctggaaagatgaagagctgaactttgatctggataaagggattgttcca
cttgttatccaggcagtggtggccgagggaggagaaggatctgctcatgctcatgtgctc
ctggctgcatttgagaagcacgtggacggcagtttttcagtgaagcctctgaagcagaag
cagatagtggatcgggtcagttacctgttgcaggagatttatggcattgagaataagaat
aaccaggacacaaagccgtcggatgatgagaacagtgataacagcaatgagtgtgtggtg
tgtctgtctgatctgcgggacactctcatcctgccctgccgacacctctgtctgtgcaac
tcttgtgccgacaccttgcgttaccaagccaacaactgccccatctgcaggctgccgttc
cgtgctcttctgcagatccgagctgtacggagaaagccagggccccttcctcccatttct
ttcagtccagttctggctcagagcctggatcatgatgacagcactggtgctgataacatt
cccccggggtatgaacccatatccttgctggaagccttgaatggactgtgctcccccccg
cccagtgctccgctctatgaagaaatttcctacagtgaggggcttccagctcgaggaccc
ccagagaacagccaccacaaagccaagcacattaaaagcactgacagtggcctgagatct
ccctcgtctcctatccatgaggaggatgaagaggtatcggctatatctgacagtgagaga
ccagctgttgtggggtcactcagcagagactcctcccacacagagagtgtctctgcggct
gctacaccagagatcgtctctactcatcgaggatctcatgttcagcctcccccagaagtg
cacaaagacaacgtttctgatcccctggagctgaaggaggaaggaacccaggagggaaca
gttctagagcctgacgcttgctccattgggattgatgagtga

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