KEGG   Xenopus laevis (African clawed frog): 399382
Entry
399382            CDS       T01010                                 
Symbol
ddx5.L, ddx5
Name
(RefSeq) DEAD-box helicase 5 L homeolog
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    399382 (ddx5.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    399382 (ddx5.L)
   03009 Ribosome biogenesis [BR:xla03009]
    399382 (ddx5.L)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     399382 (ddx5.L)
Spliceosome [BR:xla03041]
 Complex A
  U1 snRNP components
   U1 related factors
    399382 (ddx5.L)
 Complex B
    399382 (ddx5.L)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    399382 (ddx5.L)
SSDB
Motif
Pfam: DEAD Helicase_C P68HR ResIII Helicase_C_2 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 399382
NCBI-ProteinID: NP_001084230
Xenbase: XB-GENE-1010001
UniProt: Q9I8S3
Position
9_10L:54473911..54481713
AA seq 608 aa
MPGFNDRDRGRDRGFGGGPRFGGNRGGTSGKYGNPGERLMKKKWNLDELPKFEKNFYQEH
PDVVRRTPQECDQYRRSKEITVRGINCPKPILNFNEASFPANVMEAIKRQNFTEPTPIQG
QGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQPFLQRGDGPILLVLAPTRELAQQ
VQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLNRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVHINI
GALELSANHNILQIVDVCNDGEKDDKLVRLMEEIMSEKENKTIVFVETKRRCDDLTRRLR
RDGWPAMGIHGDKSQQERDWVLNEFKHGKSPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYIHRIGRTARSSKTGTAYTFFTPGNIKQVNDLISVLREANQAINPNLLQLVEDRGRFR
GRGGMNDRRDRFSSGKRGGWDRENYDRGFGGKRDFGNKSQNGFGNKSQNGFGAQNYNGNF
NSYGSNVQSGFRAGAQNGTYQNGYSTQQTGYSAPPMQNGMTQQAYTYPTATATAPAVIGY
PMPTSYPQ
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgccaggatttaacgacagggatcgaggccgagatagaggatttggaggtggtcctcgt
tttgggggaaacagaggtggtacatctggcaaatatggaaaccccggggagcggcttatg
aaraaaaaatggaacctggatgaactgccaaaatttgagaagaatttctatcaagaacat
cctgatgttgtgagacgaacaccgcaagaatgtgatcagtacagaagaagcaaagagata
accgtacgagggattaactgtccaaaaccaattctgaatttcaatgaagcaagtttccca
gcaaatgtcatggaagcgattaaacggcagaacttcactgagcccactcccatccaagga
cagggatggccagtggctctaagtggactggatatggtcggtgttgcaatgactggatca
ggaaaaactctttcttacctgcttcctgggattgtccacatcaaccatcaaccattccta
cagcggggagatggtccaattcttttggtgctggcaccaaccagggaattggctcaacag
gttcagcaagtggctgcagagtatggcagagcttgtcgtctgaggtccacctgtatttat
ggcggggccccaaagggaccacagatccgtgatctggaaagaggagttgaaatctgcatt
gcaacacctggaaggctgatagatttccttgaagcaggaaagaccaatctgaacagatgc
acatatttggtgcttgatgaagcagacagaatgcttgacatgggctttgagcctcagata
agaaagatagtagaccagattcgacctgacagacaaacactgatgtggagtgccacttgg
cctaaagaagtccggcaacttgctgaagattttctgagagactatgttcatattaacatc
ggtgccctggaactcagtgccaaccacaatatccttcagattgttgatgtgtgtaacgat
ggtgagaaggatgacaagcttgtccgtttgatggaggaaattatgagtgaaaaagaaaat
aagaccatagtatttgttgagaccaaacgacgatgtgatgatttgactcgcaggttgagg
agggatgggtggcctgcaatgggaattcatggtgataagagccagcaggagcgtgactgg
gtcttaaatgagtttaaacatggtaaatcacctattctgattgctacagatgttgcttcc
agaggtctagatgtagaagatgtgaaatttgtcatcaattatgactaccccaactcctca
gaggattatattcaccgaatcggaagaaccgcccgcagcagcaaaactggcacagcatac
accttctttaccccaggaaacattaagcaagtcaatgacctgatctccgtcctccgggaa
gcaaaccaagctatcaaccccaacctattgcagctggtagaggacagagggcgcttcaga
ggcagaggaggaatgaacgacagacgtgaccgtttctcttcaggcaagcggggtgggtgg
gaccgggaaaattatgaccgtgggtttggcggaaagagagactttggcaacaaatcccaa
aatggctttggcaacaaatcccaaaatggctttggggcacaaaattacaatggaaacttt
aacagctatggcagcaatgttcagagtgggttccgggcaggtgctcagaatggcacatac
cagaatggctacagcacccagcagactggctacagtgcacctccaatgcagaatggaatg
acccagcaggcatatacatacccaactgccacggctacagcaccagctgtcataggttat
ccaatgccaacatcctacccccaataa

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