KEGG   Xenopus laevis (African clawed frog): 399420
Entry
399420            CDS       T01010                                 
Symbol
tpm3.L
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
  KO
K09290  tropomyosin 3
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04260  Cardiac muscle contraction
xla04261  Adrenergic signaling in cardiomyocytes
xla04814  Motor proteins
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    399420 (tpm3.L)
   04820 Cytoskeleton in muscle cells
    399420 (tpm3.L)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    399420 (tpm3.L)
   04261 Adrenergic signaling in cardiomyocytes
    399420 (tpm3.L)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    399420 (tpm3.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     399420 (tpm3.L)
SSDB
Motif
Pfam: Tropomyosin Laminin_II DUF3450 TMF_DNA_bd SlyX HR1 DUF745 BORCS7 SNARE CALCOCO1 FPP CENP-F_leu_zip ATG16 DUF16 ERM_helical Lebercilin NPV_P10 Crescentin FlxA DUF1664
Other DBs
NCBI-GeneID: 399420
NCBI-ProteinID: XP_018087044
Xenbase: XB-GENE-6253902
UniProt: A0A8J0TLS1
Position
8L:132776114..132801116
AA seq 271 aa
MSGGGMSSIEAVKRKIQVLQQQADEAEEKSERLSRDLEGEKRSRETAEAEVASLNRRIQL
VEEELDRAQERLSTALQKLEEAEKTADESERGMKVIENRALKDEEKMELQEIQLKEAKHI
AEEADRKYEEVARKLVIIEGDLERTEERAELSESRCRDLEEQIRQLDHSLKCLNATEEKY
SKKEDKYEEEIKILSDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEEL
DHALNDMTSIVNCDFGGVDRRSQTRLQWKEI
NT seq 816 nt   +upstreamnt  +downstreamnt
atgtccggcggagggatgagcagtatcgaggcggtgaaacggaagatccaggtgctacag
caacaggcagatgaggcggaggagaaatcggagcggctcagccgggatttagagggagag
aagcgatcccgggagacggctgaagctgaggttgcctctctgaaccgacgtatccagtta
gtggaggaggaactggaccgggcccaggagcgtctctctactgcactacagaagctggag
gaggcggagaagacagccgatgaaagcgagagggggatgaaggtgatcgaaaacagagcc
ctgaaagatgaggagaagatggagctgcaggaaatccaactgaaagaagccaaacacata
gcagaagaagcagaccggaaatatgaggaggttgcccggaagctggtcattatcgagggg
gacctcgaacgtacagaagagagggcagaactgtctgagtcccgatgccgagacctggag
gagcagatccgccagttggaccacagcctcaagtgtttgaatgccacagaggaaaagtat
tccaaaaaagaagataaatatgaggaggaaataaagattctgtcagataagctaaaagag
gctgagaccagagcggagtttgctgagcggtccgtggccaaacttgagaagaccattgat
gacttggaagacgagctgtatgcgcagaaactcaagtacaaagctatcagcgaggagctc
gaccacgccctcaatgatatgacgtccattgtaaactgtgactttggaggggttgatagg
agatcccagacccgcttacaatggaaagagatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
Protein domain (20)   
   Pfam (20)   
All databases (108)   

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