KEGG   Xenopus laevis (African clawed frog): 399462
Entry
399462            CDS       T01010                                 
Symbol
etf1.S, cl1, etf1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
  KO
K03265  peptide chain release factor subunit 1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    399462 (etf1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    399462 (etf1.S)
   03012 Translation factors [BR:xla03012]
    399462 (etf1.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     399462 (etf1.S)
Translation factors [BR:xla03012]
 Eukaryotic type
  Release factors
   399462 (etf1.S)
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 acVLRF1 baeRF_family10 Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 399462
NCBI-ProteinID: NP_001084363
Xenbase: XB-GENE-5744946
UniProt: P35615 A0A974HQL7
Position
3S:13802226..13828862
AA seq 437 aa
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDK
ETGQEHELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMDYQGVDDEFFDLDDY
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcggacgatccgagtgctgcagacaggaacgtggagatctggaagatcaagaaactg
attaaaagcttggaagcggctagaggcaatggtaccagtatgatatctttaatcattcca
cccaaagaccagatttctcgagtggcaaaaatgctggctgatgaatttggtaccgcatct
aacattaaatcacgagtaaacagactatcggttttgggagcaattacatctgtacagcag
agacttaaactgtataataaagttccccctaatggtctggttgtttactgtggaacaatt
gtaacggaggaaggaaaggaaaagaaagtcaacattgattttgaacctttcaaaccaatc
aatacctctctctatttatgtgataacaaatttcatacagaggcactcacagctcttctt
tcggatgatagcaagtttggattcattgtaattgatgggagtggagcactttttggcaca
cttcaaggaaacacacgagaagttttgcacaaattcactgtggacctgccaaagaagcat
ggtagaggaggacagtctgccttgcgttttgcccgtctgagaatggaaaaacgacacaac
tatgtccggaaagttgctgagaccgcagtacagctgttcatctctggtgataaagtgaat
gttgctggtcttgtgttggctggatccgcagattttaaaactgagctcagtcaatcggat
atgtttgatcagcgattacagtccaaagttttgaagcttgtagacatatcttacggtgga
gaaaatggttttaatcaagcgattgagttgtcaacagaggtcctttcaaatgtgaaattt
atccaggagaagaaattaataggacgatattttgatgaaatcagccaggatactggaaaa
tattgttttggtgttgaagatactttaaaagctttggaaatgggtgcggtggaaattcta
atagtatatgagaacttggataccatgagatatgtattgaggtgcaatggatcagaagaa
gagaaaaccctttacctaactcctgagcaagaaaaggacaaatctcacttcatcgacaaa
gaaactggacaagagcatgagctaatagagagcatgcctttactagagtggtttgctaat
agctataagaaattcggagcaacactggagattgttaccgataagtcacaagaaggctct
cagtttgtgaaaggatttggtggaattggagggatcttgcgatacagagtcgatttccag
ggaatggattaccaaggagtcgatgatgaatttttcgacttagatgactactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (62)   

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