KEGG T01010: 431911

Xenopus laevis (African clawed frog): 431911

Entry

431911            CDS       T01010

Symbol

rnf8.L, rnf8, rnf8-a, rnf8-b

Name

(RefSeq) E3 ubiquitin-protein ligase rnf8-B

K10667

E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]

Organism

xla Xenopus laevis (African clawed frog)

Brite

KEGG Orthology (KO) [BR:xla00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    431911 (rnf8.L)
   03400 DNA repair and recombination proteins [BR:xla03400]
    431911 (rnf8.L)
Enzymes [BR:xla01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     431911 (rnf8.L)
Ubiquitin system [BR:xla04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    431911 (rnf8.L)
DNA repair and recombination proteins [BR:xla03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     431911 (rnf8.L)

SSDB

Motif

Pfam:

FHA zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 Yop-YscD_cpl zf-ANAPC11 zf-RING_4 zf-RING_6 zf-RING_10

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

5L:complement(23542018..23548894)

AA seq 532 aa
MADGGSGMCWCLRRCGKNQEVLLLPDGEEVTMGRGLGVTYQLKPTLCPLMISRTHCLFKQ
NARDEWTVTDNKSLNGVWRNKERLEPHKAYTLSEGTLIQLGVPPPNMESAEFEYILVREH
LDKVSGSLIRPLPGKTKATRTKRKFPSEDADASGNEGPSNFSIPKFCRVSRDGEDSAKSL
RTSHKQPKASGVEPELNDSVETDTVSPTQQQCCRSTLQLSRVRETMEEIRRLNVQIQEKQ
IKMQEKLNHPQESQLGSNSYLVVQKELQALRNQLSNEQEQHLQSVKELKEIFQEEQQSMG
SQKQAEEEHLKEQLAQALQEHTQLMQELNRNKNDFEQIIQAKNKELQETKEEKEKVCAQK
EEVLNHMNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKEECPICRQEILS
ETRSLVLDNCIDSMVDKLSPEMKNRRAALILERKEMVQAEESNPVLVVSDSSSFLSDTFY
ISSSSSDSDELGSDFWMVNEEEEYEESLFGCGTDELDSSDFESDDDDSFLIV

NT seq 1599 nt +upstreamnt +downstreamnt
atggcggacggagggtccgggatgtgctggtgcctgaggcgatgcgggaagaaccaggag
gttctgttgttacctgacggggaggaggtcactatgggccgaggcttgggcgtcacctac
caactgaaacccacgctgtgcccactcatgatctcccgcacacactgtctctttaagcag
aatgctagggacgagtggactgtgactgataacaagagtctgaatggggtgtggaggaac
aaggaaagactggaacctcataaggcttacaccctgagtgaagggaccctcatccagctg
ggggtgcccccacccaacatggaaagtgctgaatttgagtacatcctggtccgggaacat
ctagacaaggtttctgggtccctaatcaggccactgcccggcaagaccaaagcaacaagg
accaaacgcaaattcccctctgaggatgccgatgcttcgggaaatgaaggtccatctaac
ttctccatacccaagttctgccgggtctccagagatggtgaggactcggccaaatccttg
cgcacttcacacaagcagcctaaagcatctggcgtagagcctgaattaaatgactctgtg
gaaactgacacagtatctcccacccagcagcagtgctgccgcagcacgttacagctttcc
agagtcagggagacaatggaggagatccgccggctgaatgtgcaaatacaggagaagcag
ataaagatgcaagagaagctgaaccatccccaagagagccaactgggttctaacagttac
cttgtggtgcagaaggagcttcaagcgctgcgcaaccaactgagcaacgagcaggagcag
cacctgcagagcgtgaaggagctgaaggaaatcttccaggaggaacagcagagcatgggg
agtcagaagcaggcggaggaggagcatctgaaggagcagttggcacaggcactgcaggag
cacactcaacttatgcaagaactgaatcgcaacaaaaatgactttgagcagattattcag
gcaaagaataaggaactccaggagaccaaggaggagaaggagaaggtttgtgctcagaag
gaagaggttctgaaccatatgaatgatgtgctggataatgaacttcaatgcatcatttgc
tctgagcattttattgaggctgtgacattaaactgcgcccacagcttctgctcctattgt
ataaagtcatggaggaaacgtaaagaggagtgtcccatctgtcgccaagagatcttgtcc
gagactcgttcccttgtgctggacaattgtattgacagtatggtggacaagctaagccca
gagatgaagaaccggcgcgcagctctgatattggaacgcaaagagatggtacaggcggag
gaatcaaaccctgttctcgtggtcagtgacagcagttccttcctgtcggacacgttctac
atctccagcagcagctcagacagtgatgagctgggcagtgatttttggatggtgaatgag
gaagaggagtatgaagaatctctgttcggctgcgggactgatgaactggactcctctgat
tttgagtcagatgatgatgacagctttttaatagtataa

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