KEGG   Xenopus laevis (African clawed frog): 431913
Entry
431913            CDS       T01010                                 
Symbol
ssu72.L, ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    431913 (ssu72.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    431913 (ssu72.L)
   03019 Messenger RNA biogenesis [BR:xla03019]
    431913 (ssu72.L)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     431913 (ssu72.L)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     431913 (ssu72.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     431913 (ssu72.L)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 431913
NCBI-ProteinID: NP_001084864
Xenbase: XB-GENE-5725684
UniProt: Q6NRQ7 A0A974CH52
Position
7L:95996920..96043920
AA seq 194 aa
MPTAPLRVAVVCSSNQNRSMEAHNILSKRSFNVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YEQMYSDLLKKDKELYTQNGILHMLDRNRRIKPRPERFQNCKDYFDLVITCEERVYDQVV
EELNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
DKSGRTFLHTICFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgactgctccgcttcgggtggctgttgtgtgttccagcaatcaaaatcgcagcatg
gaagcacacaatattctcagtaaacggtcattcaatgttagatcatttggaacaggaact
catgtgaaacttccaggaccagctccggacaagccaaatgtttatgatttcaaaaccaca
tatgaacagatgtacagtgatctacttaagaaagacaaagaactatatacacaaaacggc
atcttgcacatgttggacagaaatagaaggatcaaaccacgacctgagcgatttcagaac
tgcaaggactactttgacctagtgattacctgtgaggaaagagtctatgatcaagtagta
gaagaattgaattctagagagcaagagacatgccagccagttcatgttataaatgttgat
attcaagataaccacgaagaagcaactctaggagcatttttgatttgtgaactttgccaa
tgtatacagcacacagaagatatggaaaatgaaatagatgaacttttgcaagaatttgaa
gataaaagtggcaggacctttctccatactatctgtttctattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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