KEGG   Xenopus laevis (African clawed frog): 443730
Entry
443730            CDS       T01010                                 
Symbol
patl2.L, p100, Pat1a, patl2, XPat1a
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    443730 (patl2.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     443730 (patl2.L)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 443730
NCBI-ProteinID: NP_001085311
Xenbase: XB-GENE-5892260
UniProt: Q4V7K4
Position
2L:13905641..13922127
AA seq 733 aa
MNLGSEQILPEDFYLAEEGALLEEMAEEDEEIDLYNEVTFGLDQESDEEPVKLEDDHTKP
IQMPEAPKEEEPEALQPVKEAKGSEKAPLHEVKIVVEPHEDHVDLSIDSGGHTMNSTMDD
SELGDPAVMKAFHGKPTLESLDSAVVDSGIGSTWSELDTDYDQSGMDSGLWEASPKVSTY
ATGQILEDKAILRIMERAPYLPPTNLEFLGSPLQRGFMPSQRLQGPEMGAMSPKPYRPRF
MRQQSPLVPRSMRPSYPFTPPRRGPSVFAPNQSPGFVSQTPFRPMSPNVSTPTRPMTPKM
VRMHFGPMSPSPSFSPFFSPMGNALQRFKVPGHVTQLHPQHRRILSQRQRPQSSSRRQWE
SRPDPYASLMSQKEKEWVIKLQMIQLQSENPHLDDYYYQAYYENLERKLSEEEFLGERKK
REPTKLVTPYIQKAETYESVVHIEGSLGQVAVSTCYSPRRAIDAVSYAMPDEAIKALGYQ
RLRVLKHAEKVFLMFLEVEELARKMSHIPEEEHVHFQHKQNYKVQRIYDVLKIAPCHNEE
ESEFLQLLQVGKGKKLVARLLPFLRSEQAREILLLVVQHLTFLIKNDSAEESLSVLYGPL
KTIINGLSFTELIGVTQELTRPLPESNDLPLTLAFQNQFGISLLYCLLSHGERLLSSDLP
MEPCIGDFEKWTDTVFLVAKELSHVSKSSMVEPLFLPSNLLSLFCRYLDKQTIHKLEDKM
ECPVIPPYTAVPS
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaatctcggctccgaacaaatattgccagaagatttttacctggcagaagagggagcc
ttgctagaggaaatggctgaagaagacgaagagattgatctgtacaatgaggtgactttt
ggcttagaccaagagtctgatgaagaacctgtcaaacttgaagatgaccatacaaagcct
attcaaatgcctgaagcaccaaaggaagaagagcctgaagcactacaacctgtaaaggaa
gcaaaaggctcagaaaaggcaccactgcatgaagtaaagattgtggtggaacctcatgaa
gatcatgtggatctatccattgattctggaggtcatacgatgaattcaaccatggatgat
tcagagcttggagaccctgcagtaatgaaggcgtttcatggaaaaccaacactggagagt
ttggacagtgcagttgttgacagtggaattggatcaacatggagtgaactggacacagac
tatgatcaaagtggaatggattctggcctttgggaggcatctccaaaggtttccacgtat
gcaactgggcaaatattggaggataaagcaattctgcgcataatggaaagggcaccttac
ctgccacctacaaatttagagtttctggggtctcctctgcagagaggatttatgccttca
caaaggctccaaggaccagaaatgggtgctatgtctcccaagccttacagaccaaggttc
atgaggcagcaatcacctcttgtaccacgctcaatgcgtccatcataccccttcacgcca
ccaaggagaggtccatcagtcttcgccccaaatcagtctccaggttttgtgtctcagact
ccctttaggccaatgtcacccaacgtcagcaccccaacccgaccaatgactcctaaaatg
gtgaggatgcactttggcccaatgtctcccagcccaagcttctccccattcttcagcccc
atgggtaatgcactgcaaaggtttaaggttccaggtcatgtcacacagctgcacccacag
catagaaggatactcagtcaacgtcagaggccgcagagttcgagtcggaggcagtgggag
agtagaccagacccttacgcgagcttaatgtctcaaaaggaaaaggagtgggtaataaaa
ctgcaaatgatacagttacaaagtgaaaatccacatttggatgactactattatcaggct
tactatgaaaacttagaacgtaaattatcggaggaagaatttttgggagaacgcaaaaaa
cgagagcctacaaaactggttacaccatacattcaaaaggcagagacctatgagtcagtg
gttcacatcgagggttcccttggacaagtggctgtttctacctgctacagcccaaggaga
gcaatagatgctgtttcctatgccatgccagatgaggctattaaagcacttgggtaccaa
agattaagagttcttaaacatgctgagaaggtgttcctcatgttcttggaagttgaagag
ctggcaaggaagatgtcccatattcctgaagaagagcatgtacacttccagcacaagcag
aactataaagtgcaaaggatatatgatgtcttaaagattgcaccctgccataatgaagaa
gaatctgagtttttgcaactcttgcaagtgggaaaaggcaagaagttggttgcacggctc
cttccattcctaaggagtgagcaggctagggagattctcttactcgtagttcagcactta
acatttctcataaagaacgactctgcagaagagtccctttctgttctctatggacccctt
aagactataatcaatgggctctccttcactgaactcatcggagtcactcaagagctcacg
cggccgttgccagagtctaatgacctgcctcttacacttgcatttcagaaccagtttgga
atctcgctattgtattgtttgctgagccacggtgagaggttgctgtcatctgacttgcct
atggagccttgcattggagactttgaaaaatggaccgatacagttttcctggttgctaag
gagctgtctcatgtctcaaagtcctccatggtggagcctctcttcttgcccagcaacctg
ctctccttgttctgccgttacctggacaagcagactattcataaacttgaggacaaaatg
gaatgtcctgttatccccccatacacagctgtaccttcatga

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