KEGG   Xenopus laevis (African clawed frog): 443765
Entry
443765            CDS       T01010                                 
Symbol
abraxas1.S, abra1, abraxas1, ccdc98, fam175a, fam175a.S
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
  KO
K20774  BRCA1-A complex subunit Abraxas
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    443765 (abraxas1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    443765 (abraxas1.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     443765 (abraxas1.S)
SSDB
Motif
Pfam: MPN_2A_DUB_like Leu_zip Mod_r PA26 DUF2192
Other DBs
NCBI-GeneID: 443765
NCBI-ProteinID: NP_001085339
Xenbase: XB-GENE-5730339
UniProt: Q6GR31 A0A974DUU7
Position
1S:126110847..126121830
AA seq 408 aa
MEGESTTAVISGFVFGALTFHHLNSGSDTEGFLLGDVMGEAKNSITDSQMDDVEVLYTID
IQKHVPCYQLSRFYNALGDLNIPELKKLLAGQKKSQNVIGWYKFRHNTEQIMTFRERLLH
KNLQEHFSNSGLVFLLLTSNPATETKSTHRLEYALHKPQDGFFHKVPLVISNLGMSDQQG
YKTLCGSCVSVGLNTAIKKHRLEFFNEDGALAEVNRISDMHMTLQEELKKTCSQLVESEN
SVEQLLEAVNDLKKQIAEKKLLMEEKGNKVSEDTEENVLLCEAFRRFFPQSALLQSCRLS
LGGRQIPHSCSVSHNSSDVNELTLMVKQYDFPEAHRRQAGKRKAHSKQLGKTSTKKSRLP
PFQRPQSDNSDSESSDSEKLLCTSGTETDGDIVQSLNVEVSRSKSPTF
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggaaggggagagcactactgctgttatatctggctttgtgtttggcgccctcaccttc
caccatctgaactcgggatctgatacagagggctttctgcttggagatgttatgggtgaa
gcaaagaattccattactgactcccagatggatgatgttgaagttctttatacgatagat
atacagaaacatgttccgtgttaccaactttccagattttacaatgcacttggtgacctg
aatattccagaactgaaaaagttgcttgcgggccaaaaaaagtctcagaatgttattggc
tggtacaaatttcgacacaacacagaacagataatgactttcagagagaggctactccac
aagaacctgcaagaacacttctcaaattcagggcttgtatttttattactaacatcaaac
ccagcaacagagacaaaatccacacaccgcttggagtatgctcttcataagccacaagat
ggcttttttcacaaggtgcccttggtcatttccaaccttggtatgtcagaccagcaggga
tataaaacattatgtggatcatgtgtttctgtcggcttaaacacagctattaaaaagcat
aggttggagttctttaatgaagatggtgctttagcggaagttaacagaatcagtgatatg
cacatgactcttcaagaggaactaaagaaaacttgcagtcaactggtagaaagtgagaac
tccgtggaacaacttctggaagcagttaatgacctaaagaagcaaatagctgagaagaaa
ttgctcatggaggaaaaaggaaataaagtttctgaagacacagaagaaaatgttttgttg
tgtgaagcttttcgcagattctttcctcagtctgctctgctgcaatcttgccggctttct
ctgggaggaaggcagatccctcacagctgcagtgtcagccacaacagtagtgatgtaaat
gaactgactctaatggtcaaacaatatgacttcccagaagcacacagaaggcaggctggt
aaaaggaaggctcactcaaaacagcttggcaaaacctcgacaaagaagtctcgacttcct
ccgtttcagagaccgcagtctgataacagtgacagtgagagtagtgacagcgagaaactg
ttgtgcaccagtggcacagagacagatggtgatattgtacaaagtttaaatgtggaagtg
tctcggtccaagtctccaactttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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