KEGG   Xenopus laevis (African clawed frog): 446487
Entry
446487            CDS       T01010                                 
Symbol
cul3.L, CUL-3-A, cul3, cul3-a, cul3-b, cul3a
Name
(RefSeq) cullin-3-A
  KO
K03869  cullin 3
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04120  Ubiquitin mediated proteolysis
xla04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    446487 (cul3.L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    446487 (cul3.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    446487 (cul3.L)
   03400 DNA repair and recombination proteins [BR:xla03400]
    446487 (cul3.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     446487 (cul3.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     446487 (cul3.L)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Stu2_CTS DUF6655 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 446487
NCBI-ProteinID: NP_001086652
Xenbase: XB-GENE-974989
UniProt: Q6DE95 A0A974HK25
Position
5L:132363524..132411969
AA seq 768 aa
MSNLGKSTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRN
AYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIR
DILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDR
GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEAR
INEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMY
KLFSRVPNGLKTMCECMSLYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESF
SNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFR
FMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSIS
NTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYL
AKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMT
ILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFT
VNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHN
VLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgtcgaatctaggcaaaagcactggcagccggaaggataccaagatgaggatccgagct
ttcccgatgactatggatgaaaaatatgtgaatagcatttgggatcttctaaaaaatgcc
attcaagagattcagcgtaaaaataacagtgggttaagctttgaagaactttataggaat
gcatatactatggttctccataaacatggggagaagctctacaccggactgagagaggtt
gtaactgaacatctcataaataaggtgcgagaagatgttttaaattctttaaataacaac
tttttgcaaactctcaatcaagcttggaatgatcaccagacggctatggtaatgattaga
gatattcttatgtatatggatagggtttatgttcagcaaaacaacgttgaaaatgtctat
aatttgggtttaataatattccgtgatcaagtggtgcgctatggctgcatacgagatcac
ctgcggcagaccttgcttgacatgattgcaagagagcgaaagggtgaagtggtggacaga
ggtgccatcagaaacgcttgtcagatgttaatgattcttggactggaaggaaggtctgtc
tatgaggaggattttgaggctccgtttttggaaatgtctgcagaattctttcagatggaa
agccagaaatttttagctgagaacagtgcgtcggtgtacataaagaaagtagaggctagg
ataaatgaagaaatcgagagagtcatgcactgtttagacaaatcgacagaagagccaatt
gtgaaagttgtggagagggagctcatttccaagcacatgaagaccattgtagagatggag
aactcagggctagtccatatgcttaagaatggcaagactgaagatcttgcatgtatgtac
aagttattcagcagagttccgaatggcttgaaaaccatgtgtgagtgtatgagtctgtac
ttgagggagcaagggaaagctctagtttctgaagagggagaaggaaagaacccagttgat
tatatccaggggctcctcgacttgaagagcaggtttgatcgtttcctccaggaatctttc
agtaatgaccgccttttcaaacaaactattgctggtgactttgagtatttcctcaatctc
aactcaagatccccagagtacctttccttatttattgatgacaaactgaaaaaaggagtc
aaaggactgacagaacaggaagtagaatcaattttggacaaggcaatggttctctttaga
ttcatgcaagagaaagatgtgtttgagcgttactataaacaacacctggccagaagactc
ctcactaacaaaagtgtttctgatgactctgaaaaaaatatgatttcaaagttaaagacc
gaatgtggctgtcagttcacgtccaagctggagggcatgttcagagacatgagcatctca
aacactactatggatgaatttaggcaacatttacagaccacaggggtctctttaggagga
gtagatctcacagtaagagtgcttaccactggctactggcctacacagtctgccacacca
aagtgtaacatcccacctgcccccagacatgcttttgaaatctttagacggttttatctt
gcaaaacacagtggtcggcaactaacattgcaacaccacatggggtctgcggatcttaat
gctacgttttatggacctgttaaaaaggaggatggctctgaagttggtgttggaggtgcc
caagtgactggttctaacacccgaaagcacatcttgcaagtctctaccttccagatgacc
atactgatgcttttcaacaacagggacaaatacacatttgaagaaatacagcaggagaca
gacatcccagaacgggagctggttagggcactgcagtctctggcttgtggaaaacccacc
caacgtgttctcacaaaggaacccaaatcaaaagagattgaaagtggccacatgttcaca
gtcaatgatcagttcacttccaaattgcacagagttaagatccagaccgtggctgctaag
caaggggaatctgatcctgaacgcaaagagacaaggcaaaaagttgatgatgacagaaag
cacgagatagaagctgccatagttcggataatgaaatctagaaagaaaatgcaacacaat
gtcctagtagcagaggtaacacaacagctgaaagcgcgatttcttccaagcccagttgtc
attaaaaaacgcattgaaggacttattgaacgagaatatttagcaagaacgcctgaagat
cgcaaagtatacacctatgtagcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (66)   

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