KEGG   Xenopus laevis (African clawed frog): 447719
Entry
447719            CDS       T01010                                 
Symbol
col21a1.L, col21a1
Name
(RefSeq) collagen alpha-1(XXI) chain precursor
  KO
K16629  collagen type XXI alpha
Organism
xla  Xenopus laevis (African clawed frog)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2 VWA_3 Laminin_G_1
Other DBs
NCBI-GeneID: 447719
NCBI-ProteinID: NP_001087858
Xenbase: XB-GENE-952330
UniProt: Q641F3 A0A974CXF3
Position
5L:100278111..100371611
AA seq 957 aa
MPGIIYILCSILLIESQYYVASENAEIRSSCRTAPNDLVFILDGSWSVGPENFEILKKWV
VNITSNFNIGPKFTQVGVVQYSDYPILEIPLGSYESIDDLSRRTQSIQYLGGNTQTGNAI
QFAIDNLFARSLRPLTKIAIVLTDGKSQDDVKHIAEEARKNKITLFAIGVGSEIEESELR
AIANKPSSTYVFYVEDYIAISRIREIMKQKLCEESVCPTRIPVAARDEKGFDILLGLGIN
KKKAKRVEGSRPRNKAYEITSQIDLTEFTGNVFPEGLPPSYVFISTLRFKIKKKWDLWRI
LALDGTIQTAVSLNGEEKTLSFTTTNEENGTQAITFTTPGVKKLFDEEWHQIRLLVTEED
ITLYVDDQEIETRKLLPVIGIYISGQTQIGKYPAREESVQFTLQKLRIYCDPEQNKRETA
CEIPGTNGECLNGPSDVGGTPAPCICPPGEKGDPGPKGDSGQPGNPGSPGQPGPDGKHGF
QGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGD
KGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGL
RGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGE
TGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGM
PGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGP
KGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQCKTQEGSPGLPGPPGPVGPEG
TRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDIEPGPQGSPGVPGPAGL
PGVGKDGRTGPLGPPGREGDRGPPGTQGPPGDAGICDPSLCYGAVMRRDPFRKGPNY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgccaggaataatctacatactgtgttctattctgctgattgagagccaatattatgtg
gcatctgagaatgctgaaataagatcaagttgcagaactgctccaaatgacttggttttc
atactagatggctcatggagcgtgggccctgaaaattttgaaatacttaaaaaatgggtt
gtcaacataactagcaattttaatatagggccaaaattcacacaagttggagttgttcaa
tacagtgactatcccatccttgaaatcccacttgggagctatgaatccattgatgacctt
tctagaagaacacaatccatccaatatttaggtggaaatacccaaactggaaatgctatt
caatttgctattgacaatctttttgcaaggtcattaagacctttaaccaaaattgcaatt
gtccttactgatggtaaatcccaagatgatgttaaacatatagcagaagaagcaagaaag
aataaaattactttgtttgcaattggcgtgggctcagaaattgaagaaagtgaacttaga
gcaatagcgaacaaaccttcttccacgtacgtgttttatgttgaagactacatagcaata
tcacggattcgtgaaatcatgaaacaaaaactttgtgaagaatctgtgtgcccaacaaga
attcctgtggctgctcgagatgagaaaggatttgatatacttttaggactgggcataaat
aagaaaaaagctaaaagagttgaaggttctagacctagaaacaaagcttatgaaataact
tcccagatcgacctcacagaatttacaggaaatgtctttccagaaggtcttcctccttct
tatgtatttatttccaccctgagattcaaaattaagaagaaatgggatctatggagaata
ttagctctagatggtaccatacaaactgctgtttctttaaatggggaagaaaaaacgttg
tcgtttactacaaccaacgaagaaaatggtacccaggctattacatttactacacctggt
gttaagaaattgtttgacgaagaatggcaccaaattcgactcttggtaacagaagaggat
attacactgtatgtggatgaccaagaaattgagacaagaaaactactcccagttatcggc
atttatatcagtggacagacacaaataggaaaataccctgctagagaagaatcagttcag
tttactctacaaaagttgagaatttattgtgatccagaacagaataagcgtgagacagct
tgtgaaattcctggaacgaatggagagtgtttaaatggtcccagtgatgttggcggcaca
cctgctccttgtatatgtcctcctggagaaaaaggagacccaggcccaaaaggagattct
ggacagcctggaaatcctggttcccctggacaacctggtccagatggtaagcatggattt
caaggaacatcagggagtccagggattcctggttcaccaggtgtgcagggacctcgtgga
tttgcaggtttaaaaggaaatactggtcaggatggtgagaagggagaccgtggaatgcca
ggattcccagggctacatggacaaccaggcatcaagggtgaaatgggacctaaaggggac
aaaggagatataggcattgatggcaaaaagggaactaaaggtgacaaaggaggtaatggt
gctactggaaaaccagggagacatggagaaccaggatcttatgggaaggatggaattcca
ggatatcctggacaaaagggtgaagaaggaaaaccaggtcctccaggaatggaaggtctc
cgtggattacctggaataccaggaattcctggaaatgatggtgcaaatggattgaagggt
gaaactggactttcaggagaaccaggtgccagaggacccacagggactcctgggatatca
ggacctgaaggcatttctggcccacaaggacctgtgggtcctaagggaaataaaggcgaa
actgggccacctggcaaagcaagccctgctggaatgaagggagaaaagggtgaaatgggc
attccagggcaacaaggatatacagggataccaggactcatgggtccaaagggcgacaaa
gggaatctgggcgaaagagggatgcagggtcacaaaggagaacatggttcctctggcatg
ccaggattaaagggtgaacatggagtcactggttctaaaggagagaaaggagaaattggt
gagcatggacatcggggaataactggaccaagaggagaacctggcaatatgggattaatt
ggtgcccctggccctagaggtatgagtggtgaaagagggacacaagggctacctggacca
aaaggacagcagggtaaagaacaatctgaagcttttataaggcaaatctgcctggatgtt
ttgaaagctcagttaccatccttaattcaaaatgatatacggcaaaactgtaatcagtgt
aagactcaggaagggtctcctggactccccggtcccccagggccagtaggcccagaaggt
acaagaggtcaccctggattaccaggaagaaatggtttttccggtcttgtggggcaacca
ggtcttccaggtatcccaggaactaaagggcttccaggcaaaccaggtgcaaagggaaat
aaaggtgacattgagccaggaccacagggttccccaggtgttccaggacctgcaggtcta
cctggtgtaggcaaagatgggcgaactggacccctggggcctcctggtagagaaggagat
cgtgggcctcctggcactcaaggtccccctggtgatgcaggaatatgtgatccatctttg
tgttatggtgcagtcatgagaagagatccatttagaaaaggaccaaattattag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (48)   

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