KEGG   Xenopus laevis (African clawed frog): 447742
Entry
447742            CDS       T01010                                 
Symbol
lamp2.S, cd107b, lamp-2, lamp2, lampb
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 precursor
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04140  Autophagy - animal
xla04142  Lysosome
xla04145  Phagosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    447742 (lamp2.S)
   04142 Lysosome
    447742 (lamp2.S)
   04140 Autophagy - animal
    447742 (lamp2.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    447742 (lamp2.S)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    447742 (lamp2.S)
   04090 CD molecules [BR:xla04090]
    447742 (lamp2.S)
Membrane trafficking [BR:xla04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    447742 (lamp2.S)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    447742 (lamp2.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   447742 (lamp2.S)
CD molecules [BR:xla04090]
 Proteins
  447742 (lamp2.S)
SSDB
Motif
Pfam: Lamp Lamp2_2nd VAS1_LD
Other DBs
NCBI-GeneID: 447742
NCBI-ProteinID: NP_001087881
Xenbase: XB-GENE-962460
UniProt: Q641C6
Position
8S:57160252..57195718
AA seq 415 aa
MGDTGAMERCACPAAVLLLSLVLMGATAFEVEIKDDKNATCIYAKLSVNITVQYETDTSS
SKNITFPVPSDVTTNGSSCGSDGKAPLLVINFGNSQSWSLNFTRNNSTYSGSALIFTYNT
NDTILFPDALRKGLISSTAMFLGPVPLNSTYKCISREVVVSENVTQIIYDVKLEAFMANG
TLGKEIICDADKPSPVPSPTQPSTTASTAIPAPTSKPLDKPTMGNYTVSDASGICLLASM
GLQINTSLLSEGKNIWRPFNIDPLGIKTNGTCTNQTGTLILTENRTIIEFTFALKNKNHF
YLEEVNITLINGSAFSSRQNQNLSTWEASVDSSYMCHKEQQIKVSEDLFINAFDVRVQPF
GVNNGTFATAEDCFADQNFIVPIVVGAALGVLVVLVMVAYFIGRRKQSSAGYEQM
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggggacactggagccatggagcgctgtgcgtgtcctgccgccgtgttgctgctgagc
ctagtgcttatgggagccacggcttttgaagtggaaataaaagatgacaaaaatgcaacg
tgtatatatgcaaagctctctgtgaatataactgtacagtatgaaaccgataccagtagc
tcgaaaaacattacctttcctgtgcccagtgacgtaacaacaaatggaagtagttgcggt
tcagatggcaaggccccattactagtcattaactttgggaacagtcaatcctggagctta
aacttcaccagaaacaacagcacatacagtgggagcgccctcatctttacttacaacaca
aatgacaccattttatttccagatgctctcaggaaagggttgattagctctactgcaatg
ttcctgggtcctgtccctctgaactcaacctataaatgtattagcagggaagttgttgtc
agtgagaacgtaacacagattatctatgatgtcaaacttgaggcgttcatggcaaatgga
acacttggtaaagagatcatttgcgatgctgataaaccatctccagtgccatctcccaca
caaccctccacaacagccagcactgctatacctgctcccacttccaaacctctggataaa
cccaccatgggcaactatacagtatcagatgctagtgggatatgcttgcttgcttccatg
ggtctccagattaatacatctttgctttcggaaggcaagaacatctggagaccatttaac
atagaccctctgggcataaagactaatggaacctgcaccaatcagactggcactttgatt
ctcacagaaaacaggactataatagaatttacatttgctcttaagaacaagaaccatttc
tacctagaggaagtgaatatcaccctaataaatggctcagcgttttcttccagacaaaat
caaaatctgagtacttgggaagcttctgttgatagttcctacatgtgccacaaggagcag
caaattaaagtttcagaagatctgttcattaatgcttttgacgtcagagtccagcctttc
ggtgtaaataatggaacttttgctacagctgaagattgctttgcagatcagaacttcatt
gttcctatagtcgtgggagctgcattgggagtcttagtcgtcctagtgatggtcgcttat
ttcattgggcgcaggaagcaaagttcagctggatatgaacaaatgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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