KEGG   Xenopus laevis (African clawed frog): 495684
Entry
495684            CDS       T01010                                 
Symbol
polr2f.S, polr2f, rbp6, RPC15
Name
(RefSeq) DNA directed RNA polymerase II polypeptide F
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03020  RNA polymerase
xla03420  Nucleotide excision repair
xla04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    495684 (polr2f.S)
  09124 Replication and repair
   03420 Nucleotide excision repair
    495684 (polr2f.S)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    495684 (polr2f.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    495684 (polr2f.S)
   03400 DNA repair and recombination proteins [BR:xla03400]
    495684 (polr2f.S)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     495684 (polr2f.S)
  RNA polymerase III system
   RNA polymerase III
     495684 (polr2f.S)
  RNA polymerase I system
   RNA polymerase I
     495684 (polr2f.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      495684 (polr2f.S)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 495684
NCBI-ProteinID: NP_001088632
Xenbase: XB-GENE-866022
UniProt: Q5U255 A0A974D042
Position
4S:101357739..101364606
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLDDLDNAEEEDRENVAILPAGEGQQANQKRITTNYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcggacaacgaggacaactttgatggagatgattttgatgatgtagaagaggatgag
gggcttgatgatttggacaatgcagaagaggaggaccgggagaatgtggcaattctgcca
gctggggaaggtcagcaggccaaccagaaacgcatcaccaccaattacatgaccaaatac
gagcgggcccgtgtgttgggaacccgtgccctgcaaatagcgatgtgcgctcctgtcatg
gtggaacttgaaggagaaaccgacccccttctcattgccatgaaggaactcaaagccaga
aagatccctataatcatcagacgttaccttccggatggcagttatgaggattggggggtg
gatgaactcatcataaccgactaa

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