KEGG   Xenopus laevis (African clawed frog): 496308
Entry
496308            CDS       T01010                                 
Symbol
afdn.L, af-6, af6, mllt4, mllt4.L
Name
(RefSeq) afadin
  KO
K05702  afadin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04520  Adherens junction
xla04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    496308 (afdn.L)
   04530 Tight junction
    496308 (afdn.L)
SSDB
Motif
Pfam: RA DIL PDZ PDZ_6 PDZ_2 ASPP1-2_RA
Other DBs
NCBI-GeneID: 496308
NCBI-ProteinID: NP_001171575
Xenbase: XB-GENE-6252098
UniProt: D5JEJ8
Position
5L:54468757..54566079
AA seq 1780 aa
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERKLDFEEKPLVVQLNWNKD
DREGRFVLKNENDIFPLKKTQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRRERDVLKQS
ADKEEGPQLRDDGENLQLAMEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSS
DGRPDSGGTLRIYADSLKPNIPYKTILLSTNDTADFAVIEALEKYGMEKENPKEYCIAKV
VLPPGAQHSDKGMKEFILDDEECPLHIFRDWPSEKGELVFQLKRRPTDSLLKQNRKHESK
SGKSKDRTDHYSLSLSTDKLPYLVELSQLFGPGIQLHHCDLNNMDGVVTVTPRSIDADTY
VDGHHISETTMLHSGVKVQFGSSHVFKFVDPNLDHLLGKRVSDTGQIGKNQRTKQGLQET
TFGLEGDVLGDVTLPANKMVSKLDNERTPSMTERGMVKPIIRMDKQQDQRVQNGRSQDSQ
GPENVLPASIEFRENSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSNKYRPDSN
AAERTHKVIAVVNKMVGMMESVIQKQKNIAGALAFWMANASELLNFIKQDRDLNRITLDA
QDVLAHLVQMAFKYLVHCLQSELTSSMPAFIDDPEENDSQRPKIEDVLHTLTGAMSLLRR
CRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLAHIEAWAEKQGL
ELAADCHLSRIVQATTLLTMDKYSHQDIPNINNTCFKLNSLQLQALLQNYHCAPDEPYIP
TELIDSVVSVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEF
LEPLCQRGFCRLVPHPRSPGIWTIYFEGADYENNLLTGNTDLPLRKEPEIITVTLKKQNG
MGLSIVAAKGAGQEKLGIYIKSVVKGGAAEVDGRLAAGDQLISVDGQSLVGLSQERAAEL
MTRTGSVVTLEVAKQGAIYHGLATLLNQPSPLMQRDRRGSGKPRPKSEGFELYNNTSQNG
SPDSPQAQWPEYTEPKKLPGDDKLLKNRADHRSSPNVANQPQSPGGKTTYSSSSTVKITS
VSTGNLCTEEETVPARPETYPIPTQTYAREYFTFPTPKSQDRIGPAQNQWQGYEDKFQVQ
MGNNHARNNSAQQIAYSEEELRDNLAFQSERGHIEPQVQKDMEHLEQNLDAKETWFNRGS
SMESSTSCQDLNNSKTHSMGSLTKTGPGRWKTPISSQTATVLLPQPVRTDLPPPPPPPVH
YGAEFEAVPIDLPLPPPPSENQLGLSANSQAAALERKKREEHQRWYEKEKARLEEERERK
RREQERKLGHVRPQPPTLPPQPVIPQSPPLIPPPNVVQTRTEKPATLPRQQDTVIRELQP
QQQPRTIERRDLQYITVSKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEINEL
QSKPNRTSEENDRLRKLMLEWQFQKRLQESQQKDDDDDDDEDDDDVDTMLIMQRLEAERK
ARLQDEERRRQQHLEEVRKREAEDRLRQEEEHRHQEEERARREAEEKRRQEEEYYTRLEA
ERRRIHEEADRRLLEPEEPGLYRPPLPREYELSSPTLLPNPPPPPPQRNTSYLKTQALSP
DTVYTAKFVTYTDDEEDTNLSGPNSYSGSSGAAVPSNEVYKGPRDMRLKSQDGEAYGPGG
APESLTFKERQRLFSHGQDVSNKVKASRKLMELENELNTK
NT seq 5343 nt   +upstreamnt  +downstreamnt
atgtcggggagtcgggaagaggagcgccgcaaactggccgacatcattaaccactggaac
gccaaccggctcgacctgttcgagatcagccagcccaccgaggatctggagtttcatgga
gtcatgcgcttttactttcaagataaagctgctggaaattttgcaacaaaatgtattaga
gtttccagcactgccacaacacaggatgtcattgaaactttggcagagaaatttcgtcca
gatatgagaatgttgtcttctcctagatactctttgtatgaagtacatgtcagtggagaa
gaaagaaaactagattttgaagagaagcctctggtggttcagctgaattggaataaagat
gatcgggaaggaagatttgttctaaaaaatgaaaatgacatctttcctctaaaaaagact
caaagcaatgggccagagaaacaggaaaaagaaggtgtaatccagaattttaagaggacc
ttgtctaaaaaggaaaaaaaggagaagaaaagacgtgagagagatgttttgaagcagtca
gcggataaagaagaggggccacagctgagagatgatggagagaacttacagttagctatg
gaggtatacaaagatatgccagagaccagctttactcgcacaatatctaacccagaggtg
gttatgaaaagaagacgacagcaaaaattggaaaaaagaatgcaagaatttcgtagctca
gatggccgaccagactctggtgggacattgaggatttatgctgacagtttaaaaccaaat
ataccatacaaaacaattttgttatccactaatgatacagcagattttgctgttatagaa
gctttggaaaaatatggaatggaaaaagaaaaccctaaggaatactgcatagctaaggtc
gtattgccacctggagctcagcattcagacaaaggcatgaaagaatttattctagatgat
gaagaatgtcctcttcacatatttcgagattggccaagtgagaaaggtgaacttgtgttc
cagttgaaaagacggccaacagatagtcttctaaagcaaaaccggaagcatgaaagcaaa
tcaggaaaaagcaaggaccgaaccgaccactattctttatcactttctactgataaactg
ccttacttggtagaattaagtcagttgtttggcccaggaatacaacttcaccactgtgac
ctaaataatatggatggagtagtcacagttactccaagaagcattgatgctgatacctat
gtggatggtcatcatatctcagagactactatgctgcacagtggagtgaaggttcaattt
ggttcttcacatgtgttcaaatttgttgaccctaaccttgatcacttgctgggtaaaagg
gtttctgatactgggcaaattggtaaaaaccaaaggaccaaacaagggttgcaagaaact
acttttggccttgaaggtgatgttcttggcgatgtcacgttgccagcaaataagatggtc
agtaaactggacaatgagagaacaccaagtatgactgagagaggaatggtaaaaccaata
ataagaatggacaagcaacaagatcaacgtgtgcaaaatggcagatctcaagattcacaa
ggaccagaaaatgtgttgcctgcaagtattgaatttagggaaaattctgaagatgccttt
ttgtctgccattattaactatacaaacagttcaactgtgcatttcaagctttcaccaaca
tatgtgctgtacatgacctgtcggtatgtattatccaacaagtacagaccagattcaaat
gctgctgagcgtacacacaaggttattgctgttgtgaacaagatggtgggaatgatggaa
agtgtaatccagaagcaaaagaacattgctggtgctcttgctttctggatggcaaatgct
tcagagcttctcaatttcataaagcaagaccgagatctcaatcgtatcacattggatgca
caagatgttcttgcacatttagttcagatggcattcaaatacctggtgcactgtcttcag
tctgaactgaccagctccatgcctgcttttatagatgatccagaagaaaatgattcccaa
aggcctaaaatagaagacgtcttgcatactctgacaggtgccatgtcacttctaaggcgt
tgccgggtcaatgcagcattaactattcagctcttctcgcagctattccatttcatcaac
atgtggctattcaacaggcttgtaacagatccagactctggtttatgctctcactattgg
ggggcaataatacgtcagcagcttgcacacatagaggcctgggctgaaaaacaaggcctc
gaattagctgcagattgtcaccttagcagaatagttcaggctactactcttctcacaatg
gataagtactcacatcaagatattccaaatataaataatacatgttttaagctgaactcc
ttacaactgcaagctctcctgcagaattaccactgtgctcctgacgaaccatacatccca
acggagttgatagacagtgtggtgtctgtagcagaaaacactgctgatgaattggctcga
agtgatggtagagaagttcagctggaggaggatcctgatcttcaactacctttccttttg
cctgaagatggttactcgtgtgatgttgttaggaacattcctaatggccttcaggagttt
cttgaaccactctgccagagaggtttctgcagacttgtccctcacccacgttcaccgggc
atatggacaatttactttgaaggagcggactatgaaaataatttgttgacaggcaataca
gacctgccattaaggaaagaacctgaaataatcactgtgacacttaaaaagcaaaatgga
atgggtttgagtattgttgctgcaaagggtgcaggacaagaaaaacttggtatttacatt
aaatctgtggtgaaaggaggtgctgcagaagtggatggccgtttagcagcaggagaccaa
cttataagtgtggatgggcaaagtttagtgggtttgtcccaagaaagagctgcggagctc
atgactagaactgggtctgtagtaacccttgaggtagcaaagcaaggagcaatataccat
ggacttgccacactactaaaccaaccatctcctcttatgcaaagagatcgacgtggctca
ggaaaaccaagaccaaagagtgaaggttttgagctttacaataacacttcccagaatggg
tctcctgatagcccccaggcgcaatggccagaatacacagagccaaagaagttaccaggg
gatgataaactattgaaaaaccgtgctgatcatcgttctagtcctaatgtggccaatcaa
cctcagagtccaggtggaaaaactacttattcaagcagctctacagtgaaaatcacttct
gtatccacgggaaatctatgcactgaggaagagactgtgccagcaagaccagaaacttat
cctatcccaacacaaacatatgcaagggagtattttacttttccaactcccaaatctcaa
gatcgaataggacctgctcagaaccaatggcaaggctacgaagataaattccaagttcag
atgggcaacaaccatgctagaaataattcagctcaacaaattgcttattctgaagaagaa
ctgagggataatttggcattccaatccgaaagaggacacattgaaccccaggtgcagaaa
gatatggaacatttggaacaaaatctggatgctaaagaaacttggttcaatcgaggctct
tctatggaatcaagtacatcttgtcaagaccttaataactctaagacacattctatgggt
tccttgaccaaaacaggacctggtcgctggaaaacaccaatttcttctcagacagctact
gttcttttgccccaacctgttagaacagaccttcctcctccaccacctccaccagttcat
tatggagcagaattcgaggcagtgcctatagacttacctctaccacccccaccatctgaa
aaccaactagggctttcagcaaattcacaggcagctgcgttagaaagaaagaagagggaa
gaacatcagaggtggtatgagaaagagaaggcccgtttggaagaagaaagagagcggaag
aggcgagagcaggaaagaaagctaggacacgttcgtcctcagccaccaactttacctcct
caaccagtaattccacagtctcctccattgattcctcctccaaatgttgtacaaaccaga
acagagaaaccggccactcttcctcggcaacaagatactgttatcagagagcttcaacct
caacagcagccacggaccatagaaagaagagacctccagtatatcactgtcagtaaagaa
gagctatcttccagtgatagcctttcaccagatccctggaagagagatgccaaggagaag
ctagaaaaacagcaacagatgcatattgtggatatgctaagcaaagagatcaatgaactg
caaagcaaacccaaccgaacttctgaagaaaatgacaggcttcgcaaattaatgcttgaa
tggcagtttcagaagagactacaagagtcgcagcagaaggacgatgatgacgacgacgat
gaagatgatgatgatgtggataccatgcttatcatgcagcgtttggaagctgaaagaaaa
gcaaggttacaggatgaagagcggagacgacaacagcatttggaagaggtgcgcaaacgg
gaggcagaagatcgccttaggcaggaagaagaacatcgtcatcaagaggaggaacgggca
aggagagaggctgaagaaaagaggagacaggaagaagagtactacactcgcttggaagct
gaaaggcgcagaattcatgaagaagcagaccggcgattgctagagcccgaagagcctggt
ctgtacagacctccactcccacgggaatatgagctttcttccccaaccctcctacctaat
cctccgcctccccctcctcaacgtaacacctcttacctcaaaacacaagccctctcccca
gacacagtttacactgccaagtttgttacatacactgatgatgaggaagacacaaatcta
tcaggaccaaattcttattctggatcatctggtgcagcagttcctagtaatgaagtttat
aaaggtccaagggatatgcgactaaaaagccaagatggagaagcttatggccctggtgga
gccccagagagcctgacctttaaggagcgccagcgtctcttctctcatggccaggatgtg
tctaacaaagtaaaggcttccagaaaattaatggaactggaaaatgagttaaatacaaaa
tga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (17)   
   UniProt (1)   
   RefSeq(pep) (16)   
DNA sequence (22)   
   RefSeq(nuc) (16)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (110)   

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