KEGG   Xenopus laevis (African clawed frog): 733398
Entry
733398            CDS       T01010                                 
Symbol
smn1.S
Name
(RefSeq) survival motor neuron protein 1 isoform X1
  KO
K13129  survival motor neuron protein
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    733398 (smn1.S)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    733398 (smn1.S)
SSDB
Motif
Pfam: SMN_YG-box SMN_Tudor SMN_G2-BD TUDOR
Other DBs
NCBI-GeneID: 733398
NCBI-ProteinID: XP_018099893
Xenbase: XB-GENE-17339467
UniProt: A0A974I276 A0A1L8HRB1
Position
1S:complement(170680714..170693877)
AA seq 303 aa
MTETLSGQLANAFSCLKSSVSMAGLGKGGEVLFRRGAAQSDDSDIWDDTALIEAYDKAVS
SFKRALKNGDCTVNAETEENNPRTKRKNNKKNRSRNKCNAAPLKKWRVGDTCNAIWSEDG
NIYPATISSIDAKRGTCIVVYSEYGNNEEHSLTDLHFPDTSEAESDQRDQEQEINGDEHS
TDESDRSSRSPQSKAAQSQEAPESSQWNGQFPPVPPPFMPGFGRHGEKLDQSHPFLSGWP
PPFLPGPPMIPPPPPMSPDACEDEEALGSMLIAWYMSGYHTGYYLGLKQGRMESSFGKPP
HQK
NT seq 912 nt   +upstreamnt  +downstreamnt
atgacggaaaccttaagtggtcaattggcgaacgcgtttagttgtctgaaaagtagcgtg
tctatggcaggtttggggaaaggtggggaagtgcttttcagacgtggagccgcacagagc
gatgactctgatatctgggatgatacggctctaattgaagcatatgataaagcagtatct
tcttttaagagagcactaaagaatggggattgtacagttaatgcagaaacagaagaaaat
aatcccaggaccaaaaggaaaaataataagaagaatagaagcaggaataagtgtaatgct
gctccgctgaaaaagtggagagtaggagacacatgtaatgccatttggtctgaagatggg
aatatctacccagccaccatctcttccattgacgctaaaagagggacttgtatagttgtt
tatagtgaatatggcaataatgaggaacatagcttgactgacctgcattttcccgatact
tctgaagcagaaagtgaccagagggatcaagagcaggagataaatggagatgagcattca
acagatgaaagtgatagatcttcaagatcacctcaaagtaaagctgcccagagccaagag
gcaccagagtcctcacagtggaatggccagttccctcctgttcctcctccgtttatgcct
gggtttggaaggcatggtgagaagttggatcaatcgcatccctttctctctggctggccc
ccaccctttctacctggaccacctatgattcctccacctcctccaatgagccctgatgct
tgtgaagatgaagaggcactaggcagtatgctgatcgcctggtacatgagcggatatcac
actggctactatctggggctaaagcaagggcgtatggaatcttcctttggaaaaccacct
caccagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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