KEGG   Xenopus laevis (African clawed frog): 734335
Entry
734335            CDS       T01010                                 
Symbol
prpf18.L, prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18
  KO
K12817  pre-mRNA-splicing factor 18
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    734335 (prpf18.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    734335 (prpf18.L)
Spliceosome [BR:xla03041]
 Complex C
  Other components
   Step II factors
    734335 (prpf18.L)
SSDB
Motif
Pfam: Prp18 PRP4 RIG-I_C DUF4020
Other DBs
NCBI-GeneID: 734335
NCBI-ProteinID: NP_001089287
Xenbase: XB-GENE-5838471
UniProt: Q5EAV6 A0A974C078
Position
9_10L:110827466..110839652
AA seq 342 aa
MDILKAEIARKRKQLEEKALVGGEKKYFKRSELTAKEKEEYFERCGYKMQKEEEEEKPSS
SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYETFQRLRKIEILAPEVN
KGLRNDLKAALDKIDQQYFNELVAGQETTDEDTQNDLKVHEENTTIEELEVLGECLGQGD
DNKDMDTINKVLKFLLGVWAKELNAREDYVKRSVHGKLASATQKQTESYLKPLFRKLRKK
NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
HVAHVLNDETQRKYIQGLKRLMTICQKYFSTDPSKCVEYNAL
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggatattctgaaagcggagatcgcgcggaagaggaagcagctggaagagaaggcgctg
gttgggggtgaaaagaagtactttaaacgcagcgaacttaccgcaaaagaaaaggaggaa
tattttgagcgatgcggatacaagatgcagaaagaagaagaggaagaaaagccttcctca
tcaagtaatccggtcttggaattagaattggcagaggaaaaattgcccatgactctctct
aggcaggaggtaatccggaggctgagagaaaggggggaacccatcagactttttggagag
acagactatgaaacctttcagcgcctacggaagatagaaattctcgcgcctgaagtcaat
aagggtttaagaaatgacctaaaggctgccctggataagattgaccagcagtatttcaat
gaacttgtagctggccaggaaacaacagacgaggatacacagaatgacctgaaagtccat
gaagagaacaccacaattgaagagctggaggttttgggggaatgcctaggacaaggggat
gacaacaaagatatggataccataaacaaggttcttaagtttcttttaggagtttgggcc
aaagaactcaacgcaagggaagattatgtgaaacgcagtgttcatgggaaacttgcaagt
gctacacagaaacaaacggaatcttacttaaagcctttattccgaaaactgaggaagaag
aacctgcctgctgacatcaaagaatccattacagatatcataaaattcatgttacaaagg
gagtatgtcaaggcaaacgatgcttacttacagatggctataggcaacgctccttggcct
atcggtgtgactatggttggtatccatgctcgtactggtcgggagaagatcttttccaag
cacgtggcccatgtactgaacgatgaaacacagcgtaaatacattcagggtttgaagagg
ttaatgaccatttgtcagaaatatttttccacggatccatcaaagtgtgtggaatacaat
gcgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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