KEGG   Xiphophorus maculatus (southern platyfish): 102218035
Entry
102218035         CDS       T02923                                 
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
  KO
K24433  thrombospondin type-1 domain-containing protein 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xma04990]
    102218035 (thsd1)
Domain-containing proteins not elsewhere classified [BR:xma04990]
 Thrombospondin domain-containing proteins
  Other thrombospondin domain-containing proteins
   102218035 (thsd1)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin TSP1_ADAMTS TSP1_CCN
Other DBs
NCBI-GeneID: 102218035
NCBI-ProteinID: XP_005807154
UniProt: A0A3B5Q5K1
Position
11:28735337..28747443
AA seq 942 aa
MPQPVLLLPFLLVLIGYAFAGLSIWPSFHEALSNGSVFVDFSTTSNNSTIINMSLSLVNM
ETNTSILSRTLPSNQLVGREEFDCSCFLYAGTFRFLLRQTSITTVFHANRTDVSSTESSA
SWWSSELQVQWPTFHISVAKARNYSEYFQVVLSSNEHFQACSRGTDSALFLEVSYMEYNQ
IGQSTVDKVRAQTRKPIKPLRSQSVELPCAFPFTERDFLRVALRSPHTVQEVKDSVPLYL
SRIFSYKLLVENASAYKSGCMGTMTVKMISPPCTHANGKILLYNAGLARLSDLTSLLMEF
RPEEQSSSLIASNWLTQGKNETEFNCSVFYPGRNKYCFRYVFNISQSHSPAQTCLVVYRR
AESWGPWHPWSVCSATCGEAVRERVRECLLPSGVRGTQCTGMMKEQSLCSLEDCDMLSSP
SPSLPSVPVRASQLGGNMIVVLGISLCLAVIMATVVVTVWRKLCQTPQCSSVHRGSIHSP
GGRKLSDEASICGHSLQRPSLSDGHCPSGAVVPQKERPSLGVQPLSPQALKSLSQDPERL
SPTGQKVLPPIFGYRLAQQQLKEMKKQGLKEATQMYHVSSSPVHDTVVETCASPTTSPIP
SPTEFACSALPLGLQDNANHSHFCTSTPLSGTLGVTSDRLSPRVEIVLGPPPVSGRSSKW
RDRTADWVEMVERSKMPSLRGEGDEASANSFHKNPNFRRTSSFSDTKLLSTSSAQSTQFR
ERSMTQVGSRTLPEGSSWTKERWERQPHPSYPIPEHRVSDWSTTKPQSNEQRKVWMGTAH
NSQVKHTGTNTNNISTSEKNAKDFSGRGERKRLADPDGRGGELVSGIGGPSLTHPWSHEV
KQLGVDRAERAEQNWNRRGPSPIQRNILARKLKEAQSCSGAKGRQRSSSFNVSSSDRRKD
WCNSLPMSRDQSSSGGSPYRLSEVEQRMLDLDLSPNFVQEKQ
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgccacagcctgtcttgctgctgcccttccttcttgtgctcataggatatgcttttgca
gggctcagtatttggccctctttccatgaggcccttagcaatggaagtgtatttgtggac
tttagcacaacatcaaataacagcaccatcatcaacatgagcctctctctagtcaacatg
gaaaccaatacttcaattctttcccggaccctccccagcaaccaactggttggtagggag
gagtttgattgttcctgcttcctgtatgcaggaactttccggttcctgctgaggcagaca
agcatcaccactgtttttcatgctaacagaacagatgtcagcagcacagaaagctcagcc
tcctggtggagctctgaactgcaagtgcagtggcccacttttcacatttctgtggcgaaa
gcacgaaactactctgaatattttcaggttgtgttatcctctaatgaacactttcaggct
tgctccagaggcactgactctgccctcttcttagaagtgagttatatggagtacaaccag
atcggacaaagtaccgttgacaaagttcgagctcaaacacggaaaccaatcaagccgctt
cgttcgcagagcgttgagctgccctgtgctttcccattcactgagagagacttcttacga
gtggctctgcgatcccctcacacagtacaagaagtgaaggactctgttcctctctatctg
tcccgtattttttcctacaaactactggtggaaaacgccagtgcctataaaagtggctgc
atgggcacaatgactgttaagatgatatccccaccttgcactcatgccaatgggaaaata
ctgctatataatgcaggcctcgcaaggctgagtgacttaacttccctgttgatggagttt
agaccagaggaacaatcttcttctttgattgcatctaattggctcacacaagggaagaat
gagactgaattcaactgctctgttttttacccaggaagaaataagtattgcttccgctat
gttttcaacatcagtcaatcccatagtccagcacagacatgtctggtggtttacagaaga
gcagaatcttggggaccctggcacccatggagtgtttgcagtgcgacttgtggagaggca
gtgagggaaagagttcgagagtgtttgctgccctctggtgtgcgaggcacgcagtgcact
ggcatgatgaaggaacaatctctatgctccctggaagactgtgatatgctatcttctcca
tctccatctcttccctctgtacctgtgagagcatcccagcttggtggaaacatgattgtg
gtgttaggtatttccctctgcttggcagtgatcatggcaacagttgttgtgactgtgtgg
aggaagctttgccaaacccctcagtgtagctcagtccacagaggctccattcattcccct
ggtgggcgcaaactttcagatgaggcctccatctgtggccatagcctccaaaggcccagc
ctctctgatggtcattgcccatcgggggcagttgttccccaaaaagagagaccctcgctc
ggagtgcagcctctctcaccacaggcactgaaatcactttcacaggatccagaaagacta
tctcccacaggtcagaaggtgctaccaccaatatttggctatcgtttggctcagcagcag
ctgaaagagatgaagaaacaagggttaaaagaggccacacagatgtaccatgtctcttca
agccctgtccatgatactgtggtagagacctgcgcctcacccaccacctcaccaattcct
tcacctactgagtttgcttgttctgcccttcccttgggtttgcaggacaatgccaaccac
agccatttttgtacatcgactcccttatctgggacattgggggtcacatcagacagactg
agtccaagggtggagatagttttgggtcctcctcctgtctctgggaggagctctaaatgg
cgtgaccgcacagctgactgggtggagatggtagagaggagcaagatgcccagtcttagg
ggagaaggagatgaagcatcagcaaatagtttccacaagaatccaaacttcagacggacc
tccagttttagtgacaccaaactcctttcaacttcttcagctcagtccacgcagtttaga
gaaaggagcatgacccaggtgggatcgcggacgcttccagaaggaagttcttggaccaaa
gaaagatgggagagacagcctcacccgtcgtatcccatcccagaacatagagtctcagac
tggagtactaccaaaccccagagtaatgagcagaggaaggtttggatggggacagcacat
aatagtcaagtcaagcacactggaacaaacactaacaatatttcaacatctgagaaaaat
gctaaagactttagtggcagaggtgaaagaaagaggcttgccgaccctgacggcagaggt
ggagagttggtctcagggattggtggtccatcccttacacatccttggtctcatgaggtg
aaacagctgggtgtagaccgagctgagcgggctgagcagaactggaaccgccgtggccca
tcacctatccaaaggaacatcctggcccggaaactgaaagaggctcagtcctgctctgga
gccaagggacgccagcgcagttccagctttaacgtctcatcatctgatcgaaggaaagat
tggtgcaactctctgccaatgtctagagaccagagcagcagcggtggctccccctatagg
ctaagtgaggtggaacaaaggatgctggacttggatctatccccaaattttgtacaggag
aagcagtag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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