KEGG   Xiphophorus maculatus (southern platyfish): 102227471
Entry
102227471         CDS       T02923                                 
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X2
  KO
K15336  tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xma03016]
    102227471 (trdmt1)
Enzymes [BR:xma01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.204  tRNA (cytosine38-C5)-methyltransferase
     102227471 (trdmt1)
Transfer RNA biogenesis [BR:xma03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    102227471 (trdmt1)
SSDB
Motif
Pfam: DNA_methylase MTS
Other DBs
NCBI-GeneID: 102227471
NCBI-ProteinID: XP_005813133
Ensembl: ENSXMAG00000002807
UniProt: M3ZKS8
Position
21:587556..612228
AA seq 406 aa
MESLRVLELYSGIGGMHYALKESGISAQVVAAVDINTTANKIYRHNFPDTPLWNKTIEGI
PLDDFNKLSFDMIMMSPPCQPFTRLGLQGDVADPRCKSFLFILELLPRLCKMPTYILLEN
VKGFESSSARDYLIKTLSDCGYTYQESMISPTNVGVPNSRLRYFLVAKMSAENLSIQTSA
KGCSFSHVTDSELPERSSVLRSKCQNTDQPSEDNPNVHVLYKRETQMDSQKKTNQNKNLS
VQQIQGYLEPQMNIDMELYLLKPKTLLRYGSILDIVQPHSRRSVCFTKGYGRYVEGTGSV
LQCCMENEISSVFTNLDQLTEEEKLQKMLKLNLRYFTPREVANLMGFPQSFTFPEDISII
QQYRVLGNSLNVLVVARLLQLITSEHFGHSEGEEQFSVLENEYPCS
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggaaagtctgcgggtgctggagctttacagtggaatcggtggcatgcactacgcgtta
aaggaaagtgggatatctgctcaggtggtggctgctgttgacatcaacaccacagccaat
aaaatctacaggcacaattttccagacacccccctctggaacaagaccattgagggtata
ccacttgatgacttcaataaattatcttttgatatgataatgatgagccctccctgccag
ccatttaccaggttaggacttcagggtgacgttgcagaccccagatgtaagagcttcctc
ttcatccttgaactccttccaaggctttgcaagatgccaacatatatcctgctggagaat
gtcaaaggttttgagagctcctcagccagggactatttgataaaaaccctgagtgactgt
ggctacacttaccaggaatccatgatctccccgacaaatgtgggggttccaaattcacga
ctgcgttatttcctggttgctaaaatgtctgcagaaaatttgagcatccagacaagtgcc
aagggttgttccttttctcatgtgacggacagtgagcttcctgaacggtcctctgtcttg
agatctaaatgtcagaatactgaccagccatcagaagacaaccccaatgttcatgtcctg
tataaacgcgagactcaaatggattctcaaaagaagactaatcagaacaaaaacctatct
gttcaacaaatacaaggctacttggaacctcagatgaatatagacatggaactttatctc
cttaaacctaaaaccttgttgcggtatggctcaattttggatattgttcagccccacagc
cggaggtctgtctgcttcactaaaggttatggaaggtatgtggaaggaactggatcagtt
ctacagtgctgcatggaaaatgagattagtagtgtgtttaccaatctggaccagttgact
gaagaggagaagctccagaaaatgttaaaattaaatctacgttattttactccgagagaa
gtagccaacctgatgggcttccctcagagtttcacttttccagaggatatctcaatcatc
cagcagtacagagttttgggaaacagtctcaatgttttggttgtggccagacttctacaa
ctgattacatctgagcattttggacattctgaaggagaagagcagttctcagtcttggaa
aatgagtatccgtgctcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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