KEGG   Xiphophorus maculatus (southern platyfish): 102227487
Entry
102227487         CDS       T02923                                 
Symbol
tmod1
Name
(RefSeq) tropomodulin-1 isoform X1
  KO
K10370  tropomodulin
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102227487 (tmod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xma04812]
    102227487 (tmod1)
Cytoskeleton proteins [BR:xma04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Capping proteins
     102227487 (tmod1)
SSDB
Motif
Pfam: Tropomodulin LRR_6 Paralemmin Ribosomal_S13
Other DBs
NCBI-GeneID: 102227487
NCBI-ProteinID: XP_023189994
Ensembl: ENSXMAG00000006094
Position
5:complement(24153938..24172314)
AA seq 372 aa
MSLLKKEMDKYRDVDEDELLKKLSEEELQRLEDELEELDPDNALLPAGLRQKDQTKKAPT
GTFQRDNLLAHLEKQAKEHPDKEDLVPFTGEKRGKAYVPKQRVDPIIENVTLEPELEEAL
ASASDAELCDIAAILGMHTLMSNQQYYEALASSTIVNKQGLNSVIQCTQYKPVPDEEPNS
TDVEETLTRIKRNDPDLVEVNLNNIKNIPIPILKAYAEALMKNTVVERFSIVGTRSNDPV
AFALAEMLKVNSTLKSLNVESNFITGAGILSLIESLQNNTTLLEIKIDNQSQPLGNKVEM
EIASILEKNTTLLKFGYHFTQQGPRLRGSNAMMNNNDLARVVRSESDGSFTFTLSVPELE
RAFGKKFKCKTK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcgctgttgaagaaggagatggacaagtacagggacgtggacgaggacgagctgctg
aagaagctgtcagaggaggagctgcagcggttagaggacgagctggaggagctcgatcct
gacaatgcgttgctgcctgctggtcttcgacagaaggaccagaccaagaaagcaccaaca
ggaacgtttcagagagacaacctgctggcccacctggagaagcaggccaaggagcatcct
gacaaagaagacctggtgccgtttaccggcgagaagagaggaaaggcgtatgtgccaaaa
cagagggtggaccccatcatagagaacgtgaccctggagccggagctggaggaagccctg
gccagtgcctctgatgcagaactctgcgacattgcagctatcctgggcatgcacaccctg
atgagcaaccagcagtactacgaagcgctggccagcagcaccatagtcaacaagcaaggc
ctcaacagtgtgatccagtgtacccagtacaaaccagtcccagacgaggagcccaactcc
actgacgtcgaggaaacgttgacgaggataaagaggaacgatcctgacctggtggaggtc
aacctcaacaacataaagaatatccccatcccaatactgaaggcttacgccgaagcccta
atgaagaacactgtggtggaaaggttcagcattgttggaacaaggagcaacgaccctgta
gcatttgcactggcagagatgctgaaggtgaactcaactctgaagagtctgaatgtcgag
tcaaacttcatcaccggggctggaatcctgtccctgattgaatcactgcagaataacacg
acactactggagattaaaatcgacaatcagagccagccgctgggaaacaaagtggagatg
gagatagccagcattctggagaaaaacaccaccttgttaaagtttggctatcatttcact
caacagggcccgcgcctgcgaggctccaacgccatgatgaacaacaacgacttggcccgg
gtcgtcaggtcagaatcggacggctccttcaccttcactctgtccgttcctgagctggag
agagcctttggaaaaaagttcaagtgcaagactaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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