KEGG   Xiphophorus maculatus (southern platyfish): 102227520
Entry
102227520         CDS       T02923                                 
Name
(RefSeq) tenascin-like isoform X3
  KO
K06252  tenascin
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04510  Focal adhesion
xma04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102227520
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102227520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:xma00536]
    102227520
Glycosaminoglycan binding proteins [BR:xma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102227520
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_Tenascin EGF_2 EGF Pur_ac_phosph_N hEGF fn3_2 NDNF_C
Other DBs
NCBI-GeneID: 102227520
NCBI-ProteinID: XP_005802200
Position
11:2014643..2081065
AA seq 1631 aa
MGTNGFLLSCLTTAVLIQLSTAGLVIRHRRETLMPKKTQENLTLPHPDQPVVFNHVYNIN
VPSTSLCTVDLDSSGGGGVKHKSASMDMQSTEHMEHTVDGDNQIVFTHRINIPKQACGCD
NQLPDIKDILNRLEMLESELSSLREQCTSGAGCCGAQATGEVSTKPFCNGRGNWSTETCS
CSCEPGWKGPNCTEPECPNDCQDQGRCVDGRCECFEGFGGDDCGVELCLLDCGDYGHCVE
GSCLCEEGFIGEDCSQTNCLNNCLGRGRCVDDECICDEPWTGFDCSELICPNDCFDRGRC
INGTCECEEGFTGDDCGELSCRENCSKHGVCVNGQCKCQINYGGEDCSKLLCPQNCNERG
HCFNGKCICDPGFEGDDCSVLSCLDNCSNRGQCINGECVCDIGYEGEDCSELSCPNNCQE
QGRCVDGQCICKKGFAGEDCSIKTCPKECHGRGDCVDGKCVCFVGFTGKDCSELTCPNDC
LDRGHCVDGQCVCHQGFTGEDCSEKTCPKNCHNRGRCVDGQCVCHQGFTGEDCHEKTCPE
NCHDRGRCVDGQCVCQEGFTGEDCSGKLCPKNCHDRGSCVDGQCVCQEGFTGEDCSEKTC
PKNCHDRGSCVDGQCVCHQGFAGEDCSEKTCPKNCLERGHCRDGVCVCFEGFTGLDCSAL
SCPEDCHHQGRCENGVCICDEGFMGEDCSEVSPPKDLTVVEVTPETVDLSWENEMRVTEY
LITYVPTAPGGLELDMRVPGDQKEATIQELEPGVEYLISVYAVLSNKKSVPVSARVATHL
PEPEGLKFKSVRETSVEVQWDPLDIPFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGL
GPGQEYEVKLEVVKNKKRGPPASKSIVTMIDAPGQVDVRDVTDTTALVTWFHPVAHVDGV
SVSFGPSLNPADRNMVELSSADTQYHLAGLSPDTQYEVSLTAKRGEQSSIPVYDSFLTDL
DAPRDLQTVEITDESITLEWRNSKAQVDQYRIKYGPLSGGDHGELLFPPGARDSTQAKIA
GLRPGTEYGMGVTAVTDERESLPTTTNAVTALDAPRDLTVAEVTETTMMLEWKRPLAKLD
SYRLVYVSADGQRAEDSVPGGSESHTLRGLNPGMMYTVSVTAERGRRSSVPASVSAATDL
GSPKGIRFSGVTDTSATVHWLTPRARVDNYQVTYMPAHGGVAKTLTVDGSQSLTLLPNLT
PGVTYEVTIVAVKEQRESEPGSDSVTTALDKPRGLTAVNITDTEALLLWQPAIATVDGYV
ITYSADSVTPVMERVSGNVVEFEMSSLKPATFYTVKVYAVRDLAKSAATTTEFTTDVDAP
QDLAATNIQTESAMLSWKPPRADISGYLLHFESAVGTIHEVVLSPTAVSYNMADLSASTE
YSVKLEALAGPKRSQVISTVFTTTGVLYRHPRDCSQALLNGDASSGMHTIYLGGDENQPL
QVYCDMSTDGGGWIVFLRRQSGRLEFFRNWKNYTAGFGDMSDEFWLGLSNLHKITSGGQY
ELRVDLRDKGEMAFAQYDKFSVSEPRTRYKVHVGGYSGNAGDSMTYHHGRPFSTYDHDND
IAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPSN
FRNLEGRRKRS
NT seq 4896 nt   +upstreamnt  +downstreamnt
atgggaacgaatggtttcctcttgagctgcctcaccacagccgtactaatccaactctcc
accgccggcctggtcatccgccaccggagggagaccctgatgcccaagaaaacccaagag
aacctgactctcccccatcccgatcagcctgtcgtgttcaaccacgtctacaacatcaac
gtcccctccacctcgctctgcactgtggacctcgactcgtctggagggggcggtgtcaag
cacaagagcgcctcgatggacatgcagagcaccgaacacatggagcacacggtcgatggc
gacaaccagattgttttcactcaccgtatcaacatccccaaacaagcctgtggctgtgac
aaccagctgccggacatcaaagacatcctgaacagactggagatgttggagtctgagctg
tctagtctgagggagcagtgcaccagtggagccggctgttgtggagctcaggctacagga
gaggtgtccacaaagccattctgtaacggacgtggaaactggagcacggagacctgcagc
tgctcctgcgaaccaggatggaagggccccaactgcacggagccagagtgccccaatgac
tgccaggaccagggtcgctgtgtggatgggagatgtgaatgctttgagggtttcggcggg
gatgactgtggtgttgagctctgcctgctggactgtggcgactacggtcactgtgttgaa
gggtcctgtctttgtgaagaaggcttcattggcgaagactgttctcagactaactgcctt
aacaactgcctgggtcgtggacgctgtgtcgatgacgagtgcatttgtgatgagccatgg
acgggctttgactgctctgagctcatctgtcctaacgactgcttcgaccgaggacgctgc
atcaacggaacctgcgaatgtgaagagggattcactggagatgactgtggagagctcagc
tgtcgtgaaaactgcagcaaacatggcgtgtgtgtgaacggccaatgtaagtgtcagata
aactacggtggagaggactgctcaaagcttctctgtccccaaaactgcaatgagagaggc
cattgctttaatgggaagtgcatatgtgatcctggctttgaaggtgacgattgctcagtt
ctctcatgccttgacaactgcagcaacaggggtcagtgcattaacggagaatgcgtttgc
gacataggatatgaaggggaagactgcagtgagctctcctgccccaacaactgccaagaa
cagggccgctgtgttgatgggcaatgcatatgtaagaaaggctttgcaggtgaagactgc
agtatcaagacatgtcccaaagaatgccatggaagaggggattgcgtagacggaaagtgt
gtgtgttttgtgggttttacaggaaaagactgcagcgaactgacctgcccgaatgactgc
ttggaccgcggtcattgtgtggacggccagtgtgtttgccaccagggtttcactggtgag
gactgcagtgagaagacatgccccaagaactgccacaacagaggccgctgtgtagacggt
cagtgtgtttgccaccagggtttcacaggcgaagactgtcatgaaaagacatgccctgag
aactgccacgacagggggcgctgtgtggacggccagtgcgtttgtcaggaagggttcaca
ggcgaagactgcagtgggaagttgtgcccgaagaactgccacgacagaggcagctgtgta
gatggccagtgcgtttgtcaggaaggtttcacaggtgaagactgcagtgagaagacgtgc
ccgaagaactgccacgacagaggcagctgtgtagacggccagtgtgtttgtcaccagggt
tttgctggcgaagactgcagtgagaagacttgccctaagaactgcctagagagaggtcac
tgcagagacggtgtctgtgtatgttttgaaggtttcacagggctggactgctctgcgctg
agctgtccagaagactgccaccaccaggggcgctgtgaaaatggagtatgcatctgtgac
gaaggcttcatgggagaggactgctctgaagtctcgccacccaaggacctcactgttgtg
gaggtgactcctgagacggtggacctctcctgggagaatgagatgcgagtgacagagtac
ctgatcacctacgttcccacagcccctggcggtctggagctcgacatgcgggtgcctggg
gaccagaaggaggccaccattcaggagcttgagcctggtgtggagtacctgatcagtgtc
tatgctgtactcagcaacaagaagagcgttcctgtcagcgctcgcgtggcaacacatctc
cctgagcccgagggtcttaagtttaagtcagttcgagagacgtcagtggaagtgcagtgg
gaccccctggatatcccatttgatggatggaacctcatcttcagaaacacaaaagaggag
gatggtgagattctcaactccctcggccggccggagaccaccttcgagcagtcgggtctg
ggtccaggccaggagtacgaggtcaaactggaggtggtgaagaacaaaaagcgtgggccg
cctgcctcgaagagcatcgtcacaatgatcgatgcccccggccaggtggatgtgcgagac
gtgacggacaccacggcactggtcacctggttccatcctgtggcccacgtggacggggtc
agcgtctccttcggacccagcctgaacccagcggatcgtaacatggtggagctgtcatct
gctgacacccagtaccacctggctggcctcagccctgatacgcagtacgaggtgtctctg
acggcaaagagaggggagcagagcagcatacctgtgtatgactccttcctcacagacctg
gatgctcccagagaccttcagacggtggaaataacagatgagagcatcactctggagtgg
aggaacagtaaggctcaggtggaccagtaccgcatcaagtacggcccgctgtctggaggc
gaccatggagaactgctcttcccgcccggagccagggactccacccaggccaaaatcgcc
ggcctgagaccggggacggagtacgggatgggagtaaccgcggtgacagatgagcgggaa
agtctgcccaccaccaccaacgcagtcacagccctggacgcccccagagacctgactgta
gcagaggtgacagagaccaccatgatgctggagtggaagcggccactggccaagctggac
tcctaccggctggtctacgtgtcggctgacggtcagagggctgaagactcggtccccggc
ggctcagagtctcacaccctgcggggcctgaaccccggcatgatgtacaccgtcagcgtc
accgccgagaggggccgcaggagcagcgtgcccgcctctgtctcagctgccacagacctg
ggctcaccaaagggcatccgcttctccggagtgaccgacacgtcggccaccgttcactgg
ctgactccaagagctcgggtggacaactaccaggtcacctacatgcctgcccatggaggt
gttgcgaagacgctgacggtggacggctcgcagtcgctcaccctgctgcctaacctgacc
cctggggtcacctatgaggtcaccatcgttgccgtgaaggaacagagggagagtgagcct
ggctctgacagcgtcaccacagctctggataagccccgtggactgactgcagtcaacatc
acagacactgaggccctgctgctgtggcaacccgccatcgcaactgtagacggttatgtc
atcacatacagcgcagattctgtgactccagtgatggagcgtgtgtctggaaacgtggtg
gagtttgagatgagctcactgaagccagctacattctacactgtgaaggtctacgcggtg
agggacttggccaagagtgcagccaccacaacagagttcaccacagatgtagacgctcct
caggacctggcagccaccaacatccagacggagagcgccatgctctcctggaagcctccc
cgggccgacatcagcggctacctcctccacttcgagtctgctgttgggaccatccacgag
gtggtcctgagccccaccgctgtgtcatacaacatggccgacctcagcgcatcgacagaa
tattcagtgaaactggaagctctcgctggtcccaagaggagccaagtcatctctaccgtc
ttcaccactaccggcgtgctgtacagacaccccagagactgctcacaggccctgctgaac
ggcgacgcctcatcaggcatgcacactatctacctgggtggagacgagaaccaaccgctg
caggtctactgcgacatgagcaccgacggaggcggatggatcgttttcctgcgacgtcag
agtggcagactggagttcttccgcaactggaagaattacacggctggttttggtgacatg
agcgatgagttctggcttggtctgtccaacctgcataagatcacatctggaggccagtac
gagctgcgggtcgacctgagagacaagggagagatggccttcgctcagtacgacaagttc
tccgtctcagaacctcggacccgctacaaagtccatgtgggaggatacagtggcaatgca
ggtgactctatgacctaccaccacggccgtccgttctccacctacgaccacgacaacgac
attgccgtgaccaactgtgctctgtcctataagggggccttttggtacaaaaactgtcac
cgggtcaacctgatgggtcgctatggagacaacagccacagcaagggtgtaaactggttc
cactggaaaggccacgaacactccatcgagttcgccgagatgaagatccgtccgtccaac
ttcagaaatctggagggaaggaggaaacggtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (167)   
   KEGG ORTHOLOGY (1)   
   RefGene (163)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (187)   

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