KEGG   Xiphophorus maculatus (southern platyfish): 102229950
Entry
102229950         CDS       T02923                                 
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
  KO
K15333  tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xma03016]
    102229950 (tarbp1)
   03036 Chromosome and associated proteins [BR:xma03036]
    102229950 (tarbp1)
Enzymes [BR:xma01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.34  tRNA (guanosine18-2'-O)-methyltransferase
     102229950 (tarbp1)
Transfer RNA biogenesis [BR:xma03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    102229950 (tarbp1)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    102229950 (tarbp1)
SSDB
Motif
Pfam: SpoU_methylase
Other DBs
NCBI-GeneID: 102229950
NCBI-ProteinID: XP_014327438
Ensembl: ENSXMAG00000009600
Position
22:complement(11299493..11313670)
AA seq 1626 aa
MSSTLIQAVLSSSPNYDTLFESLCWPEDSWPQTERVEALTALIETLGPFLTDSDSAQTPL
TGVNRSGIRDKIESVIWSKCLPFLCRLSAEARDDTRCRESTATVCRLLGVSVGVCGENVR
TGVVSSILPSLQRMSEEEPLTPGTLSVQVAAEVLAALMPLLTADEELTLDTLNCALSSVR
SLPDDLVSKVMVRIILTSLSCCSDARSNIILKRILDDVCSWHSTERTPVVTERTLLCLTV
LSDHLLKSHIATSSECREADPRLRPQFWIICQDGLTHRDSVSRKRALYLLKRCAALSEEE
GFDSRSSTSEDGETLFKWAPSKSKPLREFWEDYTLVMETLEENQVHVVRPVLNRIDTLIQ
ATVNDSEGSGLFHPSWLLCVYQRMFHSENKSLMREGVCHLLQLQVLQQPAFAAAFSQFVV
GSFMNVLSETSLFCRSPGQSVGDCPELAVKLQVFLVTFFTSLPSEDRGCVLFQLIQQLSS
KHWCAVPLLFVCQAFSHLPPCPLLKIGGLSALREVLRCTMITHQVLLRGAAQCFLLKSAL
SLTDVNEVTVDDIFSFLMHFRADESLCRGTELWNELCIWLLEHECSFKSRILDGDFTDDP
TQKETIRAYVQQEVLAYLCVPASTGQAERLPDTREADKLARALLLCVDMERRRLGGETSE
ILGSLLSPLLDTLSRVYTNIYLPVRKSDKSLQLLLRLLQLGTKPCGQEKEVEEDEVMFAI
EQTFLKLVDPVQDFILRRLCGELQELFDVERAELYLCVLRQLVVMCSSSSRCPKNIQQFA
FPRLIKYSLSVLLEPTQQVPSVANQVSKAVSMASLAAVCELLQQGGISMRADTASALKSM
NDYFCTLKTSSQFQSSLGNINKSLMKPQLLGSSSDLEAQGLLQQDWGRIAANFLRDQWIC
LNFLIRTVGIKASVEISQVSETLGAALSCSVEALALLPSDFVLPVLNFMNTLLPQLVQDQ
ENLCVQAVTLSWELVQGLSTNAHDFWPALKGFISMAFQHKLLQLTHDQAPILTTALTKIF
TDLLELSQSKSGVFGVLLQHCCQTWLPNDPAIRDQAAAVFSSVFNHLDIVTEACVYGPVF
RRDQRLVLDVQIYVEQLGAKCAANVAVTSDTRDDQLPRTCVLTFLSRLDPSDQQHQRFME
ELVMELLRKDSLISKSKVRYYGNSLQHRVKNRAWQTLLLLLPKLKEDFVATLVNHVFEAG
FCSNQASVKYLIEWMMILILVKYPHHIEKFWSCFNFDHEKTKTSICTFLSVLVHFNVIIP
HVKDKVWQLRRALDVILQSCFNHNFSVRLYALLALKKVWSLAEKEEEDDEAFQGLSSVVT
ACLNQAETMQSTGNANKNWLRIQGHFFFGAFHPIRDYSMETIFQTFPSLSELADDEWIPP
WKFEKLSFFPESLLIPLRNSAPELGQLQAGDWVQQDRSEQDKEERWSEVQKKITPWRSGI
NDQEPELKLVPAQRAARLGKQHGTLLVVASLIDKPTNLGGLCRTCEIFGASGLVLDSLHH
LNDKHFQSLSVSAELWLPLLEVKPVELTHFLQVKKSEGYCIVGVEQTANSQKLQDFKFPE
KTLLLLGNEREGIPANLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQRLITGSQE
VHSHCG
NT seq 4881 nt   +upstreamnt  +downstreamnt
atgtcttccactttgattcaggcggtactgagcagctctcctaattacgatactttgttt
gaatccctgtgctggccggaggattcgtggccgcagacggagcgtgttgaggcgctcact
gctctcatcgaaactctcggaccgtttctgaccgattcagattcggctcagactccactg
acaggtgtaaacagaagtggcattcgtgacaaaatcgagtcggtcatttggtcgaaatgt
ctgccatttctttgcagactctcggcagaagcaagggatgatacgcgctgcagagagagc
acagccactgtctgcagattgctcggtgtctccgtgggtgtttgcggggaaaacgtgcgg
actggagtggtttcatcaatcctgccgtcgttgcagcggatgtcagaggaggagccgctt
acgccggggactctcagtgtgcaggttgctgctgaagtcctggctgctctcatgcctctt
cttacagcggatgaagaactcacactcgacactttaaactgcgcgctgtcctctgtcagg
tcactccccgatgatctggtatccaaagtaatggtcaggatcattttaacttcgctcagt
tgctgcagcgatgcgaggtccaacatcatcctcaagcgcatcctggatgatgtttgcagc
tggcactccacggagcgaacaccggtggtcacagagaggacgctgctgtgtttgaccgtc
ctgtcagaccatctcctgaaatctcacatcgccacctcctccgagtgccgcgaggccgac
ccacgtctgcgtcctcagttctggataatttgtcaggacggactgacgcacagggacagc
gtgtcacgcaagagggcactgtacctgttgaaaagatgcgcagcattatccgaagaggag
ggctttgattcccgttcttctacatcagaggatggagagacattgtttaaatgggccccc
agcaaaagcaaaccgctgagggagttctgggaggattacactctggtgatggaaacgctg
gaggagaatcaggttcatgttgttcggccagttttaaacagaattgatacgttaatccaa
gcaactgtgaatgatagtgaagggtcaggcctgttccacccatcctggctgctgtgtgta
taccagcgcatgttccacagtgagaataaatccttaatgagagaaggagtgtgccatctg
cttcagctgcaggttcttcagcagccggcctttgcagcagccttttctcagtttgtcgtg
ggttccttcatgaatgttctgtctgaaacgtcccttttctgtagatcgccagggcagagt
gtaggagactgtcctgagctggcagttaagctccaggtcttcctggtcaccttcttcaca
agcctgccatcggaggacagaggttgtgttttgtttcagctgattcagcagctcagctcc
aagcactggtgtgccgtaccgctcctctttgtctgtcaggctttttcacatctccctcca
tgtcctctgctgaagatcggcggcctatctgctctacgggaggtgctacgctgcaccatg
atcactcatcaggttctgctaagaggagctgcacagtgttttttactaaagagcgccctc
tctctgacagatgtgaatgaagtgactgtagatgacatatttagtttcctgatgcatttt
cgtgctgatgagtctttgtgtagggggacagagctgtggaatgagttgtgcatctggtta
ttagaacatgaatgcagcttcaagtccagaattctggacggcgatttcaccgatgatccc
acacaaaaagaaaccataagagcctatgttcaacaagaggtacttgcttatctttgtgtt
ccagcaagcacaggtcaggcagaacggttacctgacactagagaggctgataagctggca
agagcccttctgctctgtgtggacatggagaggaggcgactgggaggagaaaccagtgaa
attctgggttcactgctgtctccgctactggacaccctgagcagagtctacaccaatatc
tacctgcctgtccgtaaaagtgacaagagtctgcagctcctgcttagactgctgcagctt
gggacgaagccttgtggtcaggaaaaagaagtggaagaggatgaggtgatgtttgctatt
gaacaaacctttcttaaacttgtcgacccagtccaggattttatcctgaggaggctgtgt
ggggagctgcaggagctctttgacgttgaacgggctgagctgtatctgtgtgtcctgagg
cagctggttgttatgtgcagctcttcgtctcgctgccccaagaacatccagcagtttgct
ttccccagactcataaagtacagcctttcagttttgcttgagccaacccaacaggtccca
tctgtggccaatcaggtgtccaaggctgttagtatggcttctttggctgctgtgtgtgag
ctcttacagcaaggaggaattagtatgagagcagatactgcttctgccctgaagtccatg
aatgattatttctgcactttgaagacttcctcacagtttcagtcatctctcggaaacatt
aacaaatccttgatgaaaccacagctattaggtagttcaagtgaccttgaagcccaaggc
ctcctgcaacaggactggggacgcattgctgccaacttcttgcgggaccagtggatttgt
ctaaacttcctgattaggactgtagggattaaagcatctgtagaaatttcccaagtgtcc
gagaccctcggagctgctctgagttgcagcgttgaggccctggctctgctgcccagtgac
tttgtgctgcccgtgctaaacttcatgaacacgctgctgccacaattggtgcaggatcag
gagaatctctgtgtgcaggcggtcactctgagttgggagcttgtacaggggcttagcaca
aatgctcatgacttctggccagcactaaagggcttcatctccatggccttccagcacaaa
ctcctgcagctgacacatgatcaggctccgattctcacgactgcactgacaaagattttc
acagacttgttggagctgtctcagtcgaagagcggtgtcttcggcgtgctacttcagcac
tgctgtcagacctggctgcccaatgacccagccatcagggatcaggctgctgctgtgttc
tctagtgtttttaaccacctggatatagtcactgaggcctgtgtttatggaccagtgttc
aggagagaccaacgactcgtcctggacgtccagatatatgtagagcaacttggtgcaaag
tgtgccgctaatgttgcagttacaagtgataccagggatgatcaactgccccgcacatgt
gtgctgacatttcttagccgcctggatccttctgatcagcagcatcagagattcatggag
gaattagtgatggagctgctgagaaaggacagtctcatatcaaagtccaaagtccgttac
tatggtaactccctgcagcatcgggtcaaaaacagagcatggcaaacactgctgctgttg
cttcccaaactcaaagaggattttgttgccactctggtgaaccacgtctttgaagctgga
ttttgcagcaaccaggcctccgtgaagtacctgattgaatggatgatgattcttattctt
gtcaaatatccgcatcatattgagaaattctggagctgcttcaactttgatcatgaaaag
accaagacgagcatctgcaccttcctgtctgtcctggttcacttcaatgtcatcattcca
catgttaaggataaggtctggcagctgcgtagagctctggacgtcatcctgcagtcgtgt
ttcaaccacaacttcagcgtgcgcctgtatgcattactggcgttgaagaaggtgtggagc
ctcgcagagaaggaggaagaggatgatgaagctttccagggactgtcttctgtggtgaca
gcctgtctgaaccaggccgagaccatgcagagcactggaaatgccaacaagaactggctg
aggattcagggtcacttctttttcggagcctttcatcccatcagggattacagcatggag
accatatttcaaacttttcccagtctgtcagagttggccgacgatgagtggatcccaccg
tggaagtttgaaaagctgtcattctttcctgaaagtctgttaatcccgttgaggaattct
gctcctgagttgggccagctccaggctggagattgggtccagcaagatcgaagcgagcag
gataaagaggagcgctggtctgaggtgcagaagaagatcacaccgtggaggtcagggatc
aacgatcaggaacctgaactgaagctggttccagctcagcgggcagctcggctgggcaaa
cagcacggcaccttgctggtggtggcctccttgattgacaagcccactaatttaggaggt
ctctgcagaacatgtgagatatttggggcgagcggtctggttctggacagtctacaccat
ctcaatgacaaacacttccagtctctgagcgtttcagctgagctttggcttcctttgcta
gaggtgaagcccgtggagctcactcatttcctccaggtaaagaagagcgaaggttactgt
attgtcggagtggagcagactgccaatagtcagaagctccaggacttcaagttccctgaa
aaaactctgctacttctgggcaacgagcgggaaggtattcctgccaatctgctccagatg
ttggacgtgtgtgtggagatcccgcaacaagggatcatccgctcactcaatgtccacgtg
agcgctgccctgttgatctgggaatatacgcggcagcgcctcatcaccggatcacaagaa
gtccactcacattgtggctga

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