KEGG   Xiphophorus maculatus (southern platyfish): 102230175
Entry
102230175         CDS       T02923                                 
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102230175 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xma03009]
    102230175 (utp4)
Ribosome biogenesis [BR:xma03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    102230175 (utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 RMC1_N Ge1_WD40 PROPPIN Lactonase
Other DBs
NCBI-GeneID: 102230175
NCBI-ProteinID: XP_005795850
Ensembl: ENSXMAG00000006171
UniProt: M3ZVG2
Position
2:3800191..3811756
AA seq 685 aa
MGEFKVHRVRFFDYMPSAIRSMAFNSHTERLAVARADGAVEIFNFADNYFQEKVIAGRDG
RSIEALCWVGCRLFSAGLDGEITEYDLENLRPRYSIEAYGGPIWTISGNSEGTLLAAGCE
DGTVKMFEVLEDRIQFQRNLSRQKGRIISLSWHPSGAQIAAGMMDMIRIFDSETGHATHR
LLVDRGVGASKSREVVVWSVAFLNDHTIISGDSAGKVQIWDGLTGTLIRTHLVTKWDVLV
LAVSQDESSVIAGTSEGTIVQFQFISSTVGQQDKLWVRTRTFKNHSHDVRALVHTDSAVI
SGGMDTQLVVRPLLDKVEKNTQESALRKIAFPHRNLVSCAKKAGLLLFQFPDHLELWRLG
ESDRNGTPGESLPVNRKPEKLIQLKTKGEDHICCSALSPCGSWLSYATVAAVRLYRLQIS
SNNISIQKVSKLPRELKSVHQLCFSSDSCRLFASSSFSSVVVVALNQTDCKYLHTLKHKS
GSRQPIHILSPSEDGQWLATANTDCEIHVFNLRKMKLHCSVPAYSSCPTAVSIHPTTGNL
VSVHADQQIFEFSLKQKEYSEWSRQLQRQGLHPLWLQRDTPVTSISFNPNNPAHIMLHDV
FMFCIIDQSLPLPEAKTKFYNQMILRSLPQPQRLRESHAFKTCKNFQHLLSVNLLEDLSL
VVVERPLVDIVAQLPAPVRQKKFAT
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgggggaatttaaggtgcaccgggtccgcttctttgactacatgcccagcgccatccgg
tccatggccttcaacagccacacggagcggctggccgtggcccgagcagatggcgccgtg
gagatctttaactttgccgacaactacttccaggagaaggtcatcgccgggcgggacggg
cggtccatcgaggcgctttgctgggtcggctgtcgtttgttcagcgccggtttggacggg
gagatcacagagtatgacctggagaacctgaggccccgctacagcatcgaggcctacgga
ggaccaatctggacaatcagcggcaacagcgaggggacgctgctggcggctggctgtgaa
gacgggactgtgaagatgtttgaggtcctggaggacaggattcagtttcagaggaacctg
agcagacagaaaggtcggatcatatcgctgtcctggcatccgtctggtgctcagatagca
gcaggaatgatggacatgatccggatctttgactcggaaacaggccacgccactcacagg
ctgctggtggaccgaggcgttggagcctcaaagagccgggaggtggtggtctggagcgtc
gcctttctgaacgaccacaccatcatcagcggcgattctgcaggaaaggtccagatctgg
gacgggttgactggaactctgatcagaacccatctggtcaccaagtgggatgtcctggtt
ctggccgtttcacaggatgagagcagtgtgatcgctgggacgtccgaaggaaccattgtc
cagttccagttcatctcctccactgtgggacagcaggacaagctctgggtccggaccaga
acctttaagaaccactcgcacgacgttagggcgctggttcacaccgactcggccgtgatt
tctggaggtatggacacccagttggtggtgagacccctgctggacaaagtggagaagaac
acccaggagtctgcgcttcgtaaaattgctttcccacacaggaaccttgttagttgtgca
aagaaagctggacttctgctcttccagttcccggatcatttggagctgtggaggcttgga
gagagcgacagaaatggaacacctggagagagtctacctgtgaataggaaaccagagaaa
ctgatccagctgaagacaaagggcgaggaccatatctgctgcagcgcgttgtctccgtgt
ggaagctggttatcttatgccaccgtcgccgccgttcgtctctacaggctgcagatcagc
agcaacaacatcagcatccagaaggtgtccaagctgcccagggagctgaagtcggtgcat
cagctctgcttctcctcggactcctgcaggctgttcgcctcttccagcttctcctccgtc
gtcgtcgtcgctctcaaccagacggactgtaaataccttcacaccctcaaacacaagtct
ggttccagacagcctatccacatcctgtctcccagtgaagacggtcagtggctcgcgacg
gcgaacacagactgcgagatccacgtcttcaaccttcgaaagatgaagctgcactgttcg
gtcccggcctacagctcctgccccaccgccgtctccatccacccaaccaccggcaacctc
gtctccgtccacgccgaccagcagatctttgagttctccctgaagcagaaggagtacagc
gagtggagccgtcagctgcagaggcaaggcctgcacccgctgtggctgcagcgcgacacg
ccggtcaccagcatctccttcaaccccaacaacccggcgcacatcatgctgcacgacgtg
ttcatgttctgcatcatcgaccagagtctgcctcttcctgaagcgaagacgaagttctat
aatcaaatgatcctccggagtcttcctcagccacaaaggctcagagaaagccacgccttc
aagacctgcaagaacttccagcacctgctgtctgtgaacctgctggaggatctgtctctg
gttgtggtggagcgccccctggtggacatcgtggctcagctccccgctcctgtccggcag
aaaaagtttgccacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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