KEGG   Xiphophorus maculatus (southern platyfish): 102232517
Entry
102232517         CDS       T02923                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04020  Calcium signaling pathway
xma04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    102232517
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    102232517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xma04040]
    102232517
Ion channels [BR:xma04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   102232517
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 Peripla_BP_6 DUF6724 Cas_APE2256 DUF3663
Other DBs
NCBI-GeneID: 102232517
NCBI-ProteinID: XP_023199117
Position
12:1559585..1611025
AA seq 904 aa
MAARSVLLLAALHCCSVALCGCEPRQVNVGAVLSQKRYEQVFKDAVTQANDLYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAMAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAH
ITDAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMASKYPDGLTGRIEF
NDDGDRRFATYSILNHQKAGRVIQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTRL
KIVTIHQEPFVYVKPTQSDGTCKQEHTVNGVVIKKVICTGPNGTIPGQPIVPQCCYGFCI
DLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSV
STVV
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggcggctcgcagcgtgctgctgctggccgcgctgcactgctgctcggtggcgctgtgc
ggctgcgagccgcgccaggtgaacgtgggcgccgtgctgagccagaagcgctacgagcag
gtgttcaaggacgccgtgacgcaggccaacgacctctacggcaaggacaagttcaagatg
aacgcaatctccgtcacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtgtacgctatcctggtcagccatcctccgcagtccaacgat
cacctgactcctacgcctgtctcttacacggccgggttctaccggatcccggtggtcggc
ctgacgactcgcatgtccatctactccgacaagagcatccacctgtccttcctgcggacg
gtgccgccgtactcccaccaggcccaggtgtggttcgacctgatgagggagttcaggtgg
aaccacatcatcctgatcgtcagcgacgaccacgagggccgagccgcccagaagaagctg
gagacgctcctggaggagcgggagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcggagaaggtgctgctgttcagccag
gacaccaacctgacggcgctgctgctggaggccaaggacctggaggcccgagtcatcatc
ctgtcggccagtgaggatgaagccatggccgtgtacaaagcggcccgtcagctcaacatg
accggttctggctacgtctggctggtcggagagcgggagatgagcgggaaagctctgagc
gaagctcctgatggcttgctgggcctccagctgatcaacgggaagaacgagtcggctcac
atcacggacgccgtggccgtggtggctcagtccctgcaggagctgtttgagaaggagaac
atcacggagccgccgcggggctgcgtggggaacaccaacatctggcggaccgggccgctc
ttcaaacgggtgctgatggcatcgaagtacccggacggcctgacgggacgaatcgagttt
aacgacgacggcgaccgccgcttcgccacctacagcatcctgaaccaccagaaggcgggg
cgcgtcatccaggtgggcgtgttcaatgggacgcaggtggtgatgaatcctcagaggaag
atcatctggcctggaggagagacggagaaaccagtgggataccagatgtccaccaggctg
aagatcgtgacgatccaccaggagccgtttgtttacgtgaagccgacgcagagcgacggg
acgtgtaagcaggagcacacggtgaacggagtcgtgatcaagaaggtgatctgtaccgga
cccaacggaaccatcccaggtcagcccatcgttcctcagtgttgctacggtttctgcatc
gacctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtggcc
gacggcaagttcggcacacaggaacgggtgaacaacagcaacaagaaggagtggaacggc
atgatgggagagctgctgggcggcctggccgacatgattgtggcgccgctcaccatcaac
aacgagcgcgctcagtacatcgagttctccaagcccttcaagtaccagggcctgaccatc
ctggtcaagaaggaaatcccccgcagcactctggactcgttcatgcagccgttccagagt
actctgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctctacctacta
gaccggttcagcccgtttggaaggtttaaggtgaacagtgaagaagaagaagaagacgcc
ctgaccctgtcctccgccatgtggttctcctggggagttctgctcaactctgggatcgga
gaaggcgccccgcggagcttctccgccaggatcctgggcatggtgtgggcggggtttgct
atgatcatcgtggcgtcgtacaccgccaacctggcagccttcctggtgctggaccggcct
gaggagcgcatcactggcatcaacgaccccaggctgcgtaacccgtcggataagttcatc
tacgccacggtgaagcagagctcggtggacatctacttccggcggcaggtggagctgagc
accatgtaccgccacatggagaagcacaactacgagagcgccgccgaggccatccaggcg
gtccgagacaacaagctccacgccttcatctgggacagcgccgtgctggagttcgaggcg
tcgcagaaatgcgacctggtgacgacgggggaactgttcttccgctccggcttcggcatc
ggcatgaggaaggacagtccctggaagcagaacgtctctctggctattctcagctcgcac
gagaacggcttcatggaggatctggacaagacgtgggttcgctaccaggagtgcgactcc
aggagcaacgcccccgccacactcacctttgagaacatggcaggtgtgttcatgctggtg
gctggcggcatcgtcgctgggatcttcctcatcttcatcgagatcgcctacaagcggcac
aaagacgcgcgcaggaaacagatgcagctggccttcgccgccgtcaacgtgtggaggaag
aacctgcagccgtacccaacggacatcaccggccagctcaacctatcggatccctccgtc
agcacggtggtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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