KEGG   Xiphophorus maculatus (southern platyfish): 102233672
Entry
102233672         CDS       T02923                                 
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma02010  ABC transporters
xma04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    102233672
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102233672
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xma02000]
    102233672
Transporters [BR:xma02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    102233672
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23 AAA_29
Other DBs
NCBI-GeneID: 102233672
NCBI-ProteinID: XP_005806547
Ensembl: ENSXMAG00000006487
UniProt: A0A3B5RBV6
Position
5:complement(24217926..24254115)
AA seq 2270 aa
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGETPGIVGNFNDSIISRLFNDAKKILLYTQNDK
SYEGYRGMLGALRKLQKNPARFKLKDFLRDDETLSHFLHHNASLPHHTLKQILEADVNLE
KVLTKGFGFHLRDLCNVTPLEEFVHIADRNVSHLTQEIICKSSSNWLNKAQNHFLSNLDF
LKPIRKDVSSDPKAVQDVSAATNNLLESLGTLGVELASMKSWKDMRKEILYLTANSTGSP
KQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGHHGNDSDSEPMSTYDNSSTPYC
NNLMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKFWSFMENSEEMDLVRSLLQSNTSAAFLDAQLSETEWSVSDVADFLTKASEDRR
PSGSAYTWRDAFNETDRAIKTISQFMECVNLDKLESVPNEERLVNKSMGLLDNQKFWAGI
VFPNIAPNSTDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYL
QDVIEQGIIRAITGTEEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDSG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENQNINTPLSKKSNADAVCFEEDPSHI
DPGVYIENLVKIYSHGNKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQI
VNDVGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQARTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDYD
LSLQSCRNSASTVSYMKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISSVIFKHVSE
ARLVEDLGHEITYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGTD
GKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLALHPSMYGEQFSFISNDIPEEPHNNKLLGALMDKPGFGTRCMEGEPIPDTPCVEV
KDDWMLPQVPQSVSDIFDKGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMMIS
DKDTLQNLTGRNVSDYLVKTYAQIIGKSLNNKIWVNEFRYGGFSLGARGSHVLSHTGDID
EAIVQLRQLFQLEQGTAAHRFFSSLSGFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNA
ILRSSLKPGQDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVTKAKHMQFISGVQPLLYWLANFIWDMCNYIVPAALVIIIFVCFQQEAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKN
LFAMAIEGVIFFCITVLIQYRFCFKARSSTGHLKPIGEEDEDVARERQRILSGGGQLDIL
ELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTSGEAYL
AGKSVNTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKL
GLIKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDL
RLVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQTT
LDQVFVNFAKDQSDEDHLKDIHLSKRDAVVVDLSQLNSFLTDSKTRESCV
NT seq 6813 nt   +upstreamnt  +downstreamnt
atggcagtctccactcagctgggtctactgctatggaagaacttcacctacagacgaaga
caaaccatccagctgctgattgaaatcatttggcccttatttatcttcttcatcctgata
tcagtccggatgtattatcctccctatgaacaacatgaatgtcactttcctaacaaggcc
atgccctcagcaggtaccctgccctgggtacaaggcattatctgtaatgccaacaatccc
tgctttcgtaatccgacccctggagaaactccaggcatagttggaaattttaatgactcc
ataatttcccgtctgtttaacgatgccaagaagattcttctgtacacccagaacgataag
agctacgaaggctaccggggaatgctgggagccctcagaaagcttcagaagaaccctgct
cgattcaagctgaaagacttcttgagagacgatgaaacgctttctcacttcctgcaccac
aacgcatcgctccctcatcacacgttgaagcaaattttggaggctgatgtcaatttggag
aaggtgctcacaaaaggttttggattccatctcagagatctttgcaacgtaacaccgcta
gaggagtttgtccacattgcagaccgtaacgtgtcccacttgactcaagagatcatctgc
aaatcatccagtaactggctgaacaaggctcagaaccacttcctctccaatttggacttt
ctgaaaccgattcgaaaggatgtgagttcagaccccaaagctgtccaagacgtctcagct
gcaaccaacaacctcctggagagcctcggcacacttggcgttgagcttgccagcatgaag
agctggaaagacatgaggaaggagatcctgtatctgactgcaaactcaacaggatctccg
aagcagatgtaccaggccgtgtcgcgtattgtttgcggacatccagagggaggcggcctg
aagatcaaatccctcaactggtacgaagacaacaattacaaggctctgttcggacaccac
ggcaacgacagtgacagtgagcccatgtccacctatgacaactcttcaactccttactgt
aacaacctaatgaagaacctggagtccagccccatttccaggatgatttggagagccctc
aaacctcttctaatggggaagatcctgtataccccagacactccagcaacacagaggatc
attcacgaggttaacaagaccttccaggagctgggggtgctgagagatctgggcggcatg
tgggaagaaatgaaacctaaattttggagcttcatggagaacagcgaagagatggactta
gtcaggtccttgctccaaagcaacaccagcgctgctttcctggacgctcagctcagtgag
accgagtggagtgtgtccgacgtggcggacttcctcacaaaagcctcagaggaccgcaga
ccttcggggtcagcttacacatggagggacgcgttcaatgaaaccgatcgtgccataaag
actatttcacagtttatggagtgtgtgaacttggacaaactggagtcagtccccaacgag
gaacgcttggtcaacaagtccatgggtcttctggataaccagaagttctgggcgggaatc
gtgtttcccaacatcgctcccaatagcaccgacctgcctcccaacatcaactacaaaatc
cgcatggacatcgataatgtggagaggacgaacaagatcaaagacggatactgggatcct
ggtcccagagcggacccctttgaggacctgcggtacgtctggggtggattttcttacctg
caggatgtcattgagcaaggaatcatccgagccatcactggtactgaggagaagacgggc
atttacatccagcagatgccctacccttgctatgttgatgatatattcctgcgagttatg
agccggtcaatgcctctcttcatgactttggcctggatgtactctgtggccatcatcatc
aaaggcgtggtgtatgagaaggaggcgcgactgaaggagaccatgaggatcatgggactg
aataacggcaccctgtggctgagctggttcatcagcagtttaatcccactgctgatcagc
gccggcttactggtgatgttgctgaagatgggaaacctattgccgtacagcgactcaggc
gttgtgtttcttttcctgggatccttcggtgttgtaaccatcatgcagtgttttctgatc
agcactctgttttcacgtgccaacctggcggcggcctgcggaggaataatatacttcacc
ctctacctgccctacgttctgtgtgttgcttggcaagattacgtgggatttggagcaaaa
cttgtagtgagtcttctgtcccctgtggcttttggcttcggctgtgagtactttgccctg
tttgaggaacaaggtgtgggaatccagtggtctaaccttctagcaagccccctggaggag
gacagctacaacctgaccacctctatatgcctcatgctgttcgatgcagtgctgtacgga
ataatgacttggtacattgaagccgtttttcctggtcagtacgggatccccaggccttgg
tatttccctttcacaagaacatattggtgcggagagaaggagaatcaaaacattaatact
cctctgtcaaagaagagcaacgctgacgctgtgtgcttcgaggaggacccaagccacatc
gacccgggtgtttacattgaaaacctggtgaagatctacagccatggaaacaagctggct
gtggacggattgacccttaaattctatgaaggccagatcacctccttcctcggccacaac
ggggctggcaagactacaaccatgtcaatcctgaccggactgttcccacccacctctggc
accgcctacatcctcggcaaggacatccgctccgagctcagcaccattcggcagaacctg
ggggtctgcccccagcacaatgtgcttttcagcatgttgaccgtcgaggagcacatctgg
ttctacgctcgcctgaagggcctgcctgaagagaaagtgaaggctgaaatggaacagatc
gtcaacgatgtcggactgccacacaagcgaaagtctcgcaccagcacgctgtcaggtgga
atgcagaggaagttgtctgtagcgctggcgtttgtcggaggttctaaggttgtcattctg
gacgagcctactgctggtgttgatccgtacgcacgcaggggaatctgggatctgctcctt
aaatacagacaagcccgcaccatcatcctttccacccaccacatggatgaggctgacatc
ctgggcgaccgtattgctatcatttcccatggcaagctgtgctgtgtgggctcctctctc
ttcctgaagactcacctcggaaccggctactacctgacgctggtcaagagagactacgac
ctgtctctacagtcctgcaggaattctgccagcaccgtctcctacatgaaaaagacagag
aaggaggacagcgtatcagagagcagttcagatgctggtcttggcagcgaacctgaaagt
gagactaccactattgacgtctccctcatctccagtgtgattttcaaacacgtctcagag
gctcgtctggtggaagatctcgggcatgagatcacctacgtcttgccataccagtcggct
aaagacggcgcttttgttgagcttttccatgagcttgatgatcgacttactgacttagga
atttcaagttacggaatttctgacaccaccttggaagagattttcctgaaagtggcagaa
gatagcggtgttgattctgttgagctttcagatggagtcgtaccaaccagaacccgacgg
cgacatgcttttggagaccaccagagctgcctgaagcccttcaccgaggatgactttgac
ttcaatgactctgaaggtgacccagaatctcgtgagactgactggctcggtggaacagat
ggcaaaggttcatatcaggtcaaaggctggagtctgaagagacagcagtttgttgcgctc
ctgtggaaacggttcctctacgctcgccgctctaggaaaggctttttcgctcagattgtt
ctgccagcagtgtttgtgtgcattgcactggtcttcagcctcattgttcctccgttcggg
aaatacccgagtctggctctgcatcccagcatgtatggagagcagtttagcttcatcagt
aacgacatacccgaagaaccccacaacaacaaactgctgggagctttgatggacaaacca
ggatttggaactcgatgcatggaaggagagcccataccggacactccctgtgtggaggtg
aaggatgattggatgctccctcaggttcctcaaagtgtcagtgatatattcgacaaaggc
aactggaccatggaaaacccgtctccactgtgtgagtgcagctgtgaaggccgtaagagg
atgctgcccgagtgtcccgctggggccggtggacttccaccgccacagatgatgatcagt
gacaaagacacactgcagaatttgactggtagaaacgtgtcggactacctggtcaaaacc
tacgctcagatcatcggcaagagcttgaataacaagatctgggtcaatgagttcagatac
ggtggattctctctgggcgcccgaggttcccatgttttgtcccacacaggtgatattgat
gaagctattgtgcaactcaggcaactcttccaacttgaacagggaacggcagcccatcgt
tttttcagcagtctctctggttttatccaaggattggacacaaagaataacgttaagatt
tggtttaacaacaagggctggcacagcattggctccttcctcaacgtgatgaacaacgcc
attctgcggtcgagtctcaaacctggtcaagacccaacgaagtttggcatcaccgcttac
aaccatccactaaacctcaccaaggagcagctctcacaagttgcattgatgacgacatct
gtggacgtgttggtgtccatttgtgtcatcttcgccatgtcctttgtccctgccagtttt
gtggtcttcctcatccaggagagagtaacaaaggccaaacacatgcagttcatcagtggt
gtgcagcccttgctttactggctggccaactttatttgggatatgtgtaactacatcgtt
ccagctgcgctagtgatcatcatatttgtctgtttccaacaagaagcctacgtttcttcc
accaatctaccagtactggctctgctgcttctcctctatgggtggtcaatcacccctctg
atgtacccagcctctttcttctttaagatccccagcactgcctacgtagttctaaccagt
gtcaacatactgattggaatcaatggcagtgtgtccacgtttgtcctggagttgtttgga
agtaatgagattggtggtattaatgacatcttgaagaatgtattcctcatcttccctcac
ttctgcctgggtagaggactgattgacatggtgaagaatcaagccatggctgatgcttta
gagagatttggtgaaaaccggtttcgctctcctctggcatgggacatggtgggaaagaac
ctgttcgccatggctatagagggagttattttcttctgcatcaccgtcctcattcagtac
cgcttctgctttaaagccagatcctccaccggccatctgaaaccaattggagaagaggat
gaagatgttgccagagagcgacagaggatcctgagcggcggtggacagttggacattctt
gagctgaggcagctcaccaagatttacaagcggaaacagaagccggccgtggaccggctg
tgtgttggcatccctcccggagagtgttttggtttgcttggggtcaacggagcaggaaag
accagcaccttcaaaatgttgactggagactcagatgtgaccagcggtgaggcctactta
gctggcaagagcgtaaacacagaaataaacgaggtgcatcagaacatgggctactgtcct
cagtttgatgccatcaatgaccttctgactggaagagagcacctcgagttctacgccatc
ttgagaggagtacctgagaaggaagtctgcgaggtggcagagtgggggatacggaaactg
ggattgatcaagtatgtggacaaagcagcagggagctatagtggaggaaacatgaggaaa
ctctccactgccattgcactcataggaggaccccctgttgtgtttttggatgaaccaaca
acaggaatggaccctaaggcacgtcgggccctctggaacgccatcctgagcatcatcaaa
gagggacgttccgtggtcctcacctcccacagtatggaggagtgtgaagcactctgtacc
agaatggctatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcaccttaaa
aatcggttcggagacggctacaccatcatcttgcgcgtggcgggaccggacccggaccta
cggctggtgatggagttcatagagcgggaattgccggggagcacgttgaaggagaaacac
cgcaacatgctacagtaccagctcccgtcttcgctcacctccctcgcccggatcttctcc
cttctctccaaaaacaaggaggcactcagcatagaggactactctgtctctcagactact
ttagaccaagtgtttgttaatttcgccaaggaccaaagtgacgaggaccacttgaaagac
atccacctgagcaagcgggatgcagtcgtggtggacctttctcaattgaactctttcctc
acggacagcaaaacaagagagagctgcgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

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