KEGG   Xiphophorus maculatus (southern platyfish): 102235561
Entry
102235561         CDS       T02923                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102235561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xma03000]
    102235561
   03021 Transcription machinery [BR:xma03021]
    102235561
Transcription factors [BR:xma03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    102235561
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102235561
  RNA polymerase III system
    TFIIIB
     102235561
  RNA polymerase I system
    SL1/TIF-1B
     102235561
SSDB
Motif
Pfam: TBP DUF3378 Auxin_repressed
Other DBs
NCBI-GeneID: 102235561
NCBI-ProteinID: XP_005800978
Ensembl: ENSXMAG00000001362
Position
19:27572018..27582449
AA seq 333 aa
MDDLALERYFDDSIANDPSYMVEEELDLQNSLKESHASSTNSQNSSNLLGETETSGRLSN
DLDLSFLPDDLGNQSSTTTVLATAATNQNAELDVLEDSGINLDDNLHDMAAVKCQVTVNL
GSESNASPFCPMTPMTPMTPMTPMTPMTPVTEKSGIIPQLQNIVSTVNLGCPLDLKFIAL
QARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEESRLAARKYARVVQKLG
FPARFLDFKIQNMVASCDVCFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIF
VSGKVVLTGAKERAEIYEAFENIYPILKGFRKQ
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggatgatttggcattggaacgttactttgatgattctatcgcaaatgacccgagctac
atggttgaggaggagcttgatcttcaaaactctctcaaagagtcacatgcatcaagcacc
aactcacagaattcatccaacctattgggtgaaactgaaacaagtggcaggttgagtaat
gatctagacctcagcttcctacctgatgacctcggcaatcaaagctctactaccacagtc
ctagctacagcagccacaaatcaaaatgctgagcttgatgttttggaggacagtggcata
aatctggatgataatttgcatgatatggctgcagtgaaatgtcaagtgacagtcaatttg
ggatcagagagcaatgcttccccgttctgtcctatgactccaatgaccccgatgactcca
atgaccccgatgactccaatgacccctgtgacagagaaatcgggaatcattccacagcta
caaaacattgtctccactgtaaaccttggctgtccgttggatctaaaattcattgcactg
caagccagaaatgcagagtacaatccaaagcgctttgcagctgtaatcatgaggatccgt
gagcctcgaacaacagcactgatcttcagctcagggaagatggtctgtacaggagccaaa
agtgaggaggagtcccgtctggcagcaaggaaatatgcccgggtggtccagaaacttggc
ttccctgcccggtttctcgactttaagattcagaacatggtggccagctgtgacgtctgc
ttccccataagactggaaggactggttctcacccaccaacaattcagcagttatgagcct
gagttattcccaggacttatctacaggatggtgaaacctcgtattgtcctgctcatcttc
gtatctgggaaggtggttttgactggagctaaagaacgtgcagagatctacgaagccttt
gagaacatttatcccatcctgaaaggctttagaaagcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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