KEGG   Xiphophorus maculatus (southern platyfish): 102235847
Entry
102235847         CDS       T02923                                 
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03020  RNA polymerase
xma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102235847 (polr2g)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102235847 (polr2g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102235847 (polr2g)
   03019 Messenger RNA biogenesis [BR:xma03019]
    102235847 (polr2g)
   03400 DNA repair and recombination proteins [BR:xma03400]
    102235847 (polr2g)
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102235847 (polr2g)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102235847 (polr2g)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102235847 (polr2g)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 102235847
NCBI-ProteinID: XP_023184349
Ensembl: ENSXMAG00000010063
Position
23:complement(15322662..15326317)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PSRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccatatttctttggaacatgaaatcttactacacccgaggtattttggaccc
aacctgctgaacactgtgaagcagaaactttttactgaagtggagggaacatgtactggc
aagtatggctttgtcattgcagtcaccactattgacaacatcggggcgggtgtaatccag
ccaagcagaggcttcgttctgtatcccgtgaagtacaaggccattgtcttccgtccattc
aagggagaagtggtggatgctgtggtcactcaggttaacaaggttgggctattcacagaa
attggtcccatgtcttgcttcatctctcgccattccattccttcggaaatggagtttgac
cccaattctaatcctccttgctataagactgttgatgaggacattgtaattcagcaagat
gatgagatccggctgaaaattgtgggcacaagggttgacaagaatgacattttcgcaatt
ggatctctcatggatgactatctgggtcttgtgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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