KEGG   Xiphophorus maculatus (southern platyfish): 102237087
Entry
102237087         CDS       T02923                                 
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102237087 (u2surp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xma03041]
    102237087 (u2surp)
Spliceosome [BR:xma03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102237087 (u2surp)
 Complex B
    102237087 (u2surp)
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 102237087
NCBI-ProteinID: XP_014324082
Ensembl: ENSXMAG00000002608
Position
21:complement(9144778..9157863)
AA seq 972 aa
MADRTPGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEEF
LAAFEGGGEGKVKAFVRGGLANASKEESSSDEKRGKLYKPKSRFETQPKSILPLETPSQF
LPADKRNTLKKGSEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPGSEGRRS
SDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVK
IMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIY
IPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMIPPPKNKEEFEKTLSQAIVKVVIPTE
RNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFDNQSPAHVYYRWKLYTILQGE
SPAKWRTEDFRMFKNGSLWRPPPLNPYLHGPYDDGDEEEEEEEGNKKGSLKEEERDKLEE
MLRGLSPRRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYN
SSAKVSNASYYRKYFETKLSQIFADLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYP
DPFLIKLQNIFLGLVNLSLEKEVPLVVEPEPAEDLDGAPLGEFVDGAPLEDVDGVPIDAV
PIDGAPIDGAPLDDLDGVPIKSIDDDIDGIPLDQSAGATFKVAPSKWEAVDEAELQAQAV
TTSKWEIFEQPEESKKGEADSDDDDRSPRSEDNQSYSNPIRDDSDMKAKMSEMNEEKRTK
LREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLEREKEREKKEK
EKAEARLKELKKEKEKDDTPTRKERKRHHSGSPSPSRSGSRRGRSSSPRSERSERSERSD
RSYSKDTSSRSSHKDSPRSSNKKSSKRSPSLPRTPKRSRRSRSRTPKKSTKKSRSRSRSP
HRSHKKSKKSKH
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggcggaccgaacgcctggctctcaaaaagctagcgctaaggcgctgcttgagagcaaa
ctcaagtctttcagcattggtaagatggctgtggcaaaaagaactttaagcaagaaggaa
caagatgaaataaagaaaaaggaagatgagcgagcagcggcagagatttatgaagagttt
cttgctgcttttgaaggaggaggagagggcaaggtcaaagcatttgtccgagggggtctt
gcaaatgcatccaaagaggaatcatcttctgatgagaaaaggggaaagctatacaagccc
aaatcccgttttgagacccagccaaaaagcatcctgcctttggagactccatctcagttt
ttaccagcagacaaaagaaatactttaaagaagggcagtgaaaaggaaaagaagaagagt
aacttggaactttttaaagaagaacttaaacaaatccaagaagaaagggatgaaagacac
cggatgaaaggacgcgtcagtcgcttcgagcctctgcctggatcagagggaagacgctcc
tcggatggttcttcaagaagaaaccgtccgtccagtgttttggacgactgcgcgccagga
tcccatgatgtcggcgatccatccactactaacttgtatcttggaaacatcaatccacag
atgaatgaggagatgttgtgtcaagaattcgggcggtatggccctctggccagcgtgaaa
atcatgtggcccaggacggatgaggagcgagctcgggagaggaactgtggatttgtggcc
tttatgaacaggagggatgctgagcgagccctcaagaacctaaatggaaaaatgatcatg
aactttgaaatgaaattaggatggggcaaaggtgtgcccattccccctcaccccatatat
atccctccctccatgatggagcatacactcccaccccctccctccggcctacccttcaac
gcgcagccccgagagaggctaaagaaccccaatgctccaatgattcctccacccaaaaac
aaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaa
aggaatctgctctctcttatccaccgcatgatcgaatttgtggtgcgtgaaggcccaatg
tttgaagccatgatcatgaacagagaaatcaacaatccaatgtacaggtttttatttgac
aaccagagcccggcacacgtatactatcgttggaagctctacactatactacagggtgaa
tccccggccaaatggcgaacagaggactttagaatgtttaaaaatggctctttatggcgt
ccgcctcctcttaatccgtacctacacggtccttatgatgatggtgatgaagaggaggaa
gaggaggagggaaacaagaaaggctccttgaaagaagaggagcgggacaaactggaggag
atgctccgcggtctgtctccgaggagaggagacgtggcagaggccatgctgttttgtctg
aaccacgctgaagctgctgaggagattgtggagtgtatcgctgagtccctctccattctg
aagacccctctaccaaagaagattgcacggttatatctcgtttctgatgtgctgtacaac
tcttctgccaaagtatccaatgcgtcttactacagaaaatattttgagacgaagcttagc
cagattttcgctgatctcaacgccacatacaagacgatacaaggacacctgcagagcgag
aacttcaagcaacgagtgatgtcatgtttccgggcgtgggaggattgggctgtgtaccct
gatccctttcttattaagctgcagaatattttccttggacttgttaatctctccttggaa
aaggaggtccctcttgttgtagagcctgaacctgcagaagacctcgatggggcccctctg
ggggagtttgtagatggagccccgctggaggacgtggatggggtccctattgatgctgta
cccattgatggggcgccaatcgatggagctcctctcgatgatttagacggggttcctatt
aagtccattgatgacgacatcgatggaatacctctggatcagtcagcgggagcaactttc
aaggttgcaccctcaaaatgggaagcggtggatgaggcagagttacaggctcaagctgta
acaacctcaaaatgggagatatttgagcaaccagaagaatcaaagaagggtgaggcagac
agtgatgatgacgacaggagccctcgctcagaggataatcagagctactccaaccccatc
agagacgactctgatatgaaagccaagatgtctgaaatgaatgaggagaaacgcaccaag
ctcagagagattgaggttaaagtcatgaagttccaggatgagctggagtctgggaaaagg
cccaagaagcctggacagagtatccaggagcaggtggagcactacagggacaaactgcta
cagaaggagaaagaaaaagagaaacttgagcgtgagaaagaaagggagaaaaaagaaaag
gagaaagcagaggcgcggttaaaagaactgaagaaggaaaaggagaaggatgacacacca
accaggaaagaaagaaagcggcatcacagcggctctcccagtccatcgaggagcggcagc
agacgaggccggtcatcctcgccgcggtcagagcgctcagagagatcggaacgctccgat
cgatcatactctaaagacacatcgtcacgctcatcccataaagactctcctcggtccagc
aacaaaaaatcgtccaagagatctccatctttacctcgcacaccgaagcgatcgaggcgg
tcgcgctccaggacacccaagaaatcaaccaagaagtcccgctccagatctagatccccc
caccgatctcacaagaaatctaagaagagcaaacactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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