KEGG   Xiphophorus maculatus (southern platyfish): 102237329
Entry
102237329         CDS       T02923                                 
Name
(RefSeq) contactin-1a-like isoform X1
  KO
K06759  contactin 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102237329
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xma04515]
    102237329
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xma00537]
    102237329
Cell adhesion molecules [BR:xma04515]
 Immunoglobulin superfamily
  Contactins
   102237329
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:xma00537]
 Others
  102237329
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set Ig_5 Pur_ac_phosph_N C2-set_2 Ig_4 Ig_6 Big_3_4
Other DBs
NCBI-GeneID: 102237329
NCBI-ProteinID: XP_023208486
Ensembl: ENSXMAG00000017213
Position
2:21350755..21421654
AA seq 1020 aa
MLHLALLLHLLAFSLADSPEQGTVLDPLEADDATGFGPVFEEQPVDTIYPEEAPEARIVM
TCQARANPPATYRWKLNNTDVDLSKPGSSYSLSGGNLIISNPVRSEHVGKYSCLATNMYG
TVVSQEASVQFGYLDLFSPEERQAVHVKEGQGAVLLCAPPPHYPGELSFRWILNEFPTFI
PLDKRRFVSQITGNLYISKVESSDRGNYSCFTSSPSISKSVFSKFIPLKPLAERSIRKYP
ADLSVKFPHSTALVGQDIILECFALGNPVPEIHWRRKGKILPHNHEVRMAGAQLFIPNVQ
FNDSGVYICEAANHKGKDSHHANVSVEAHPEWVEHIVNTEKDLFSEYTMSCIAKGVPKPQ
IRWLKNGEPLDGTELRFSRLTSDDAGMYQCIAENRHGVIYANAELRVFFGAPKFPHNHVR
RVLAPKNGRVVIECKAKAAPKPTITWSKDTELLSNSSRMFIWEDGSLEILNVTPQDEGRY
TCFAENDWGKANSTRPLVVTESTKITLAPSNADVHIGDNTWMECAASYDPMVDITFVWSL
NGQEIDLDKDSTHYESTLNGSSNAKLLIKNAQLKHAGRYTCTAKTHVDNTSASAHLVVRG
PPGAPGGVRIVDRSDKSVTLQWSRGADNHSPISKYTIQYRDEFLKDIWKNATTSPADVEG
NAESAKVVDLFPWTEYEFRVTATNTLGTGEPSRPSSKEKTLESVPVVAPSDVGGGGGASR
ELTITWTPVQPQYYYGPNFGYIVAFKPHEEKQWNRVAVPGPEAKHYVHKDPNLTPMTQFE
VKVKAFNRQGEGPYSLTTIIYSSQDAPSEPPVILEAKALSATAASVSWMLLSENNTDGYQ
VKYWRPNEDSEGGALWVGVSGKENHTRLEGLKPSSDYMIEVRGYNSAGYGPPSNHIKIHT
KKPPPDRPPKILDAKIKGEYVNVAWEPVVPLSNESLIENYKVLYKQKGMPTGTLYSTNKR
FIDLPLRTDGEYVVEVRAHTEGGDGAVAQISTQNYSGAIMSSSSLNVLPMLLVALLLLNL
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgctgcacctcgccctgctccttcatcttctggccttctcgctcgcagattcaccagag
caagggactgtactggaccctttggaagcagatgatgccacaggtttcggcccggtgttt
gaggagcagccggtggacactatctaccccgaggaggcacccgaggccagaattgtcatg
acctgccaggcgagagccaatccacctgccacatacagatggaagctgaacaacacggat
gttgacctgagcaaacctggcagcagctacagtttatcgggaggcaacctgattatcagc
aaccccgttagatcggaacacgtggggaaatactcctgcttggctaccaacatgtacggc
acggtcgtcagccaagaggcgtctgtccagttcggatatctcgatcttttttcaccggaa
gagaggcaggcagtgcatgttaaggagggccagggggccgttctgctctgcgccccccct
ccacattatccaggcgagctgtcgtttcgatggatcctcaatgaattccccactttcatc
ccactggacaagcggcgctttgtctcccagataaccggcaacctttacatctccaaggtg
gaatcgtcggacaggggcaactattcctgcttcacgtccagcccatccatctccaagagc
gtgttttccaaatttattcccctaaagcctcttgctgaacgttccatcagaaaatatcct
gctgacctcagtgtaaagttcccacactccactgcattggtgggacaggacatcatcttg
gaatgctttgcattggggaaccccgtacctgagattcactggaggaggaagggcaaaatt
ttaccacataatcatgaggtgcggatggcaggtgctcagctgttcatcccaaatgtccaa
ttcaatgacagcggcgtctatatttgtgaagcggctaaccacaagggaaaggactctcac
catgctaacgtatctgtggaggcacatccagagtgggtggagcacattgtcaacacagag
aaagacctgttcagcgaatacaccatgtcttgcattgccaaaggtgttccgaaacctcaa
atccgctggttgaaaaatggagaaccgcttgatgggaccgagttgagattcagcaggctg
acatcagacgatgcgggaatgtaccagtgcatagcagagaatcgccacggagtcatttat
gccaacgcagagctaagagtgttttttggggctccaaagtttccccataaccatgtaaga
agagtgctggcaccaaaaaatggccgggtggttattgaatgcaaagccaaagccgcccca
aagcccaccataacctggagcaaagacacggagctgctctccaactcctccaggatgttc
atctgggaggatggcagcctggagatccttaatgtgacgccccaagatgagggaaggtac
acctgttttgcggagaacgactggggaaaggccaacagcacgcgccctctggtggtcaca
gagtccacaaagatcacgctggctccctcgaacgctgatgttcacattggagacaacacc
tggatggagtgtgcagcatcgtatgacccaatggtggacatcacctttgtctggtccctg
aatggacaagaaattgatttggacaaagatagcacacattatgaaagcaccctgaacgga
agttcaaacgctaaactactcatcaaaaatgctcaactgaaacatgctggacgctacacc
tgcactgcaaaaacccatgtggacaacacctccgcttcagcccacctggttgtcaggggg
ccccccggtgccccaggtggggtgcgaatagttgacagatcggacaagagcgtcacgctg
cagtggagccgtggagcagacaaccacagccccatctccaaatacaccatccagtaccga
gacgagttcttgaaagacatctggaagaatgccacaacatctcctgctgatgttgagggg
aatgcagaatcagccaaagtggtggatttgttcccttggacagaatatgagttcagggtc
acggccaccaacactctggggacaggagagccaagcaggccgtcaagcaaagagaaaacc
ctggaatcagttcctgtggtggcgccctcagatgtcggcgggggcggcggggccagcaga
gagctgaccatcacatggacgccagtgcagccacagtactattatggacctaattttggc
tacattgtggcctttaaaccccatgaagaaaagcagtggaacagggtggcagtaccggga
cctgaggccaagcactatgttcacaaagaccccaacctcactcctatgacacagttcgaa
gtcaaagttaaagccttcaacaggcaaggagaaggaccctacagcttaacaaccatcatt
tactcctcacaggatgctccatctgaacctccagtgattcttgaagcaaaagcactttct
gccacagcggcctctgtctcctggatgcttctgtcagagaataataccgatggataccag
gtgaagtactggagacctaatgaagacagtgaaggtggagcgctctgggtcggggtgtca
gggaaggaaaaccacaccaggctggagggtctgaagcccagctcagactacatgattgag
gttcgaggctacaactctgcgggttatggaccacccagcaaccacatcaagatccacacc
aagaaaccccctccggatcgacctccgaagatattagatgcaaagataaaaggcgagtat
gtgaatgttgcctgggaaccagtggtaccactttctaatgaatccctaatagaaaactac
aaggtcctgtacaagcagaaaggcatgccaacaggcacgctgtactcaaccaacaagcgc
ttcattgatcttcccctgcgtacagatggggaatatgtggtggaagtccgcgcgcacaca
gagggaggagacggcgctgtggctcaaatcagcactcagaactacagtggagcaatcatg
tcctcttcatctctcaacgtcctcccaatgctcctcgtggctctcctccttctgaacctc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (56)   

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