KEGG   Xiphophorus maculatus (southern platyfish): 102237438
Entry
102237438         CDS       T02923                                 
Name
(RefSeq) lysine-specific demethylase 6B-like
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102237438
Enzymes [BR:xma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     102237438
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102237438
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 102237438
NCBI-ProteinID: XP_023198473
Position
11:23667022..23694170
AA seq 1726 aa
MYHPAELYSGRNTWDPYPAGGPNRGQWAPVNGRPWSHPQRYQEEHNQSHHSLSSHLYNRG
NRTVNHVQDKGISKGHRHPQRIWDGKEQQFEAQSWHHNSSRLFPNQSGNSYLTGPGQRYV
DWQNNQGHPRLNRGSRELQSPIDRWGASDHHRGFTGRMANNRHGPWKRPTLHQRREQLPH
HSPPPQHHLSSRNGCPAKRKRDSDPDQSSHLGSRHLSPPPHAPSSPSHYRCNQDDRAGPC
HRSEHRTSASHQQETSEPRTGGHGAGDSEPPNQSLISRPPHYGNKGKVEGKISVSPADHT
RVPYSQQNHHYHHQRHTSHQKVPQHNKPPRPLEEKDLQSHHHKQSTEQKRSHSRFNSRDS
TLCKNSAAEFSPSSTPLCSPKDGRSTSSSPGAPSSPSSFAVSSCRRDSADIHPRLPTLSE
QQKSLAGPGHVQRPSLTSTCHTSDSGSKSRFSDPKHRKTSVCSRQSPVARPRMSKPEKGL
EELRKTEIKRKDKLIKKQKMNDFANGNNEERKRRKKKEEKSVDERNRKRDKAIKKDRKLR
LKLKRMKKEKLSSVDAFSCPGEAKLDEMETQSLSGINQSQSLRKHKTWKRGEQVKRTLDK
PTTSNANATSQSPTSKSKQIPKGSSIPTELPVNKHPIESIADPESLHQSSSVTLHSGDGT
NINSGKTFLSIFHKASTPLSTTCSAGSDQLVHGKDEKKVGVLNAPDLQPEAVLGNLSDTG
ENNANTPPVLSWQGSPVSDFDEDEEELKKGVISRPVLQPSPTQCLSPLPADSESTGEPDG
YSLNSPTEFCEPPCAVEEDIEEDKEEQENTSRKETGLLLNDFDQHKAGLDDVFKSLATFL
EGQRASCRGGPFGGATSRGVKHSSSLTVAPQIHCDENQDLCHKSSPTAFLESNSQSPPDS
TSDSLLKSQSLPFRKDSAPHPKAQENQEETESCSDDNGVGKNKENLLERTDSSLLEGSLS
AELRVTTTHTASFTGVITVSTKDRRENRKESKRTATKRKRKHKDGGREDIVKIKVNKKDS
KCKTKANPSKDAHKRGISSSVSVISKSSTRPLADSMKGQIPQENQTPYGKDIKRVKLDTG
DADVKVEVGVLGKKITPDTNTSNTGTSAARIKTSRQSGAITPASKSPFSKGPVDPLKLKA
LSMGLSKELKVVLIKMDSAGRQTFNISELEEPRIPMSKLSIDNTAAEVVRACRGDRVKGK
FKESFLLPLFCVKPKIAIDTPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDSKNAVTV
IRGLAGSLRLNLGLFSTKSLVEANSDHAVEVRTQVQQPADENWNLNGSAQTWPCESSRSH
TTIAKYAQYQASSFQESLEEEKESENEEEEEDKTSDTLATTKAALTLPNSKVSPTSMTNK
ANSTSSSKAQLANSPSTPSPEQKTVGKIIKFGTNIDLSDPKRWKPQLQELLKLPAFMRVE
SSNNMLSLVGHTILGMNSVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHY
WDAINQFCDKHGVDYLTGSWWPVLEDLYSSNIPVYRFIQRPGDLVWINAGTVHWVQAVGW
CNNIAWNVGPLNAYQYQLALERFEWNEVKKVKSIVPMIHVSWNVARTLKITDKDTYKMIK
HCLMQSMKHIQILRDQLVTAGKKIFYQSRMKDEPAYYCNECDVEVFNLLLVTSENSTKKT
YVVHCEDCARAKSSSLAGVVVLEQYRMEELMKIYDSFMLTPPPPSK
NT seq 5181 nt   +upstreamnt  +downstreamnt
atgtatcacccggcggagctctactctggccgcaacacatgggacccctacccagctgga
gggcctaacagaggacaatgggcgcctgtcaacggtcgcccctggagccacccacaaaga
taccaagaagaacataaccagtcacatcattcactatcaagtcatctgtataacaggggg
aacagaacagtcaaccatgtccaggataagggcatctcaaagggccatagacatccgcaa
agaatttgggatggtaaagagcagcaatttgaggcccagagctggcatcacaactcttca
cgcttattccccaaccaaagcggtaacagttatctaactggccctggacaacgctatgtc
gactggcagaacaatcaagggcatcctcgcttgaatcgcggcagcagagagttgcagtcc
ccgattgatagatggggtgcgtcagaccaccacagaggcttcacaggcagaatggccaac
aacaggcatggaccttggaaacgtcccacccttcaccaacggagagagcagctgcctcat
cacagtccaccccctcagcaccatctatcttcgaggaatggatgtccagctaaaaggaaa
agggactctgacccagatcaatcatctcatcttggatcgaggcatttatctccacctcct
catgccccatcatcgcctagccactaccgttgcaaccaagatgacagagcgggtccctgc
catcgctctgaacacaggacctcagcatctcatcaacaggaaacctctgaaccacgaacg
ggaggccatggcgctggtgactcggaacctcccaaccagagtctcatcagcagaccacca
cattatggtaacaaagggaaggtcgaagggaaaatctcagtttcaccagcagaccacacc
cgtgtgccttacagccagcaaaatcatcactaccatcatcaacggcacacaagccaccag
aaagttccacagcacaacaaaccaccacgccccctggaggaaaaggacttgcagagccat
catcacaagcaaagcacagaacagaagcggtctcattcaaggttcaattcaagggattca
accctgtgcaaaaattctgctgcagagttttcccccagttcgacccctctctgcagtcct
aaagatggtcgttccacttccagcagtcctggagctccctccagtccctcctcattcgcc
gtgtccagttgcaggagagattcagcagacattcacccacgccttccgactctcagtgaa
cagcagaagtctctagcaggccccggtcacgtccagagacctagcctgacatccacatgc
catacgtctgactctggctcaaaatccaggttttcagaccccaaacacaggaaaacctca
gtctgttcacgacaatctcctgttgccaggccgaggatgagcaagcccgagaaggggctg
gaggagctcagaaaaactgagatcaaacggaaggataagcttattaaaaaacagaaaatg
aatgattttgcaaatggaaataacgaggaaaggaaaagaaggaagaaaaaagaagagaaa
agcgtagatgaaaggaataggaagagagataaagcaattaagaaagacagaaaattgcgc
ttgaaattaaaaagaatgaagaaggaaaagctttcttccgtcgatgctttctcctgtcca
ggagaggccaaactggacgaaatggagacgcaatctttgtcaggaattaatcaaagccag
tcactccgaaaacacaaaacctggaaaagaggtgaacaagtcaaaagaacattggacaag
ccaaccacttccaatgccaacgctacttcccagtccccaacttcaaagtccaagcaaatc
cctaaagggagcagcattcccacagagctaccagtaaataaacaccccatagaatccata
gccgaccctgaaagtctccatcagagcagcagtgttacattgcattcaggagatggaaca
aatatcaactctggtaaaacattcctttcaatcttccataaagcctcaacacctctcagt
accacgtgctcggctgggtcagaccagctggtccatggcaaagacgagaagaaggtggga
gttctcaatgcgccagaccttcagcctgaggctgtgctgggaaatctcagtgacacggga
gaaaacaatgcaaacactcctcctgtgctcagctggcagggctcccccgtttcggatttt
gatgaagatgaggaagagctgaaaaagggcgtaatcagtagaccggttctccagcccagt
cccactcagtgcttatctcctctccctgcagatagtgaaagcactggcgaaccggatggc
tactctctcaacagcccaactgagttctgcgagccaccttgtgcagtcgaagaagatatt
gaggaagacaaagaagagcaggagaatacaagtaggaaagaaacgggcttgcttcttaat
gactttgatcaacataaagcaggtttggatgatgtcttcaagagcctggccaccttcctt
gaaggccagagagcatcatgtcgcgggggtccttttggtggggccacttcaagaggggta
aagcattcatcatctctcacagtggcgccccagattcactgtgatgagaatcaggatctt
tgccataaatcatcccccacagccttcttggagtctaacagtcaatcacctcctgattct
acctcagactcacttttgaaatcccaaagtctgccatttcgaaaagattcagctcctcat
cccaaggcgcaggagaatcaggaagaaactgagagttgttcagatgataacggggtggga
aagaataaagagaaccttctggagcgaacggattcctcacttctggagggatcgttgagt
gcggaactgagagtgaccacaactcatactgcctctttcactggtgtcattaccgtctcc
accaaggacaggagagaaaacaggaaagaatccaagcggactgctacaaaaaggaagaga
aagcataaagatggcgggagagaggacatcgtaaagataaaggtcaataaaaaagatagc
aagtgcaaaactaaagctaatccttcaaaggatgcgcacaagaggggtatttcatcctct
gtatccgtcatctccaaaagctccaccagacctcttgcagacagcatgaagggccagatt
cctcaggaaaatcaaacgccatatggtaaagacatcaagagagtcaaactggacactggg
gacgctgatgtgaaggtggaggttggtgtgttaggaaagaagataaccccagataccaac
acctcaaacacaggaacctcagctgcaagaatcaaaacatcacgtcagtcaggtgctatc
acaccagcaagcaaatctcccttctccaaaggtccagtggatcccttgaaactgaaagca
ttgtccatgggcttgtccaaagagctgaaggtcgtgctgattaaaatggacagtgccggg
agacaaacgtttaacatatcggagctggaggaacccaggatcccaatgtcgaagctcagc
atcgacaacacagcagctgaagtggtcagagcatgcaggggagatagagtgaaggggaaa
ttcaaggagtcattcctgcttcccttgttctgtgtcaaacccaaaattgccattgacacc
cccattccacgggaaaagctcaacccacccacaccaagcatctatttggagagcaagagg
gatgccttctctccagttctgcttcagttctgtacagattccaaaaatgccgtaacggtc
atccggggcttggccggctccctccgccttaatctcggtctgttctccaccaagtcgctg
gtggaggccaattcagaccacgccgtggaagtgagaactcaggttcaacagcctgctgat
gagaactggaacctaaacggctctgcacaaacctggccctgtgaaagcagtcgatcgcac
accaccattgccaaatatgcccagtaccaggcctccagtttccaagagagcctggaggag
gagaaagaaagtgagaatgaggaggaagaagaagataagacatcagacacattagcgacc
acaaaagctgccctgactttacccaatagtaaagtcagtcccacttcaatgacaaataaa
gccaactccacttcttctagtaaagcccagttggctaattcccccagcactcccagccca
gagcagaaaacagtgggaaagatcattaaattcgggaccaacattgatctctctgaccct
aaaaggtggaagccccagctgcaggagcttctgaagctcccagcgttcatgcgagtggaa
tccagcaacaacatgctcagtctcgttggtcacaccatcctggggatgaactccgtgcag
ctgtacatgaaggttcccggcagccgaactcccgggcatcaagagaacaacaacttctgc
tctgtcaacattaatatcgggcctggagattgtgagtggtttgcagtacacgaacactac
tgggacgccataaaccaattctgcgacaagcacggagtagactatcttacggggtcctgg
tggccagtgctggaggatctctacagctccaacatccctgtgtaccgcttcatccagaga
ccaggagatctggtgtggatcaacgccgggaccgttcactgggttcaagccgttggctgg
tgcaacaacatagcctggaatgtgggaccgctcaatgcataccaatatcagctcgctctg
gagcgctttgagtggaacgaggtgaagaaagtgaagtcgatcgtgcccatgatccacgtt
tcgtggaacgtggctcgtaccctcaagatcacggacaaggacacctacaagatgatcaag
cactgcctcatgcagtctatgaagcacatccagattctaagagaccagctggtgactgca
ggaaagaaaatcttttaccagagccgcatgaaggatgagcccgcctactactgcaacgag
tgtgatgtggaggtgtttaatctgctgttagtaaccagtgagaacagcactaagaagacc
tacgtggtgcactgtgaggactgcgctcgagctaagagctcctctctggcaggggtggtg
gtgctggaacagtatcggatggaggagctgatgaagatctacgacagtttcatgctgacc
cctccacctccgtcaaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (102)   
   KEGG ORTHOLOGY (1)   
   RefGene (98)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (114)   

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