KEGG   Xenorhabdus nematophila AN6/1: XNC2_0339
Entry
XNC2_0339         CDS       T03752                                 
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    XNC2_0339 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xnm03021]
    XNC2_0339 (rpoA)
   03400 DNA repair and recombination proteins [BR:xnm03400]
    XNC2_0339 (rpoA)
Enzymes [BR:xnm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     XNC2_0339 (rpoA)
Transcription machinery [BR:xnm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     XNC2_0339 (rpoA)
DNA repair and recombination proteins [BR:xnm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      XNC2_0339 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: CEK21341
Position
I:279036..280025
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTVNKSGIGPVTAADIIHDGD
VEIVKPQHVICHLTDESASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccattagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtgactgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgtacaggaagatatcctggag
attctcctcaatctgaaagggctggcggtgaaagttcagggtaaagatgaagttatcctt
accgtgaataaatctggcattggccctgtgactgcagccgacatcatccatgatggtgat
gtcgaaatcgtcaagccgcagcacgtaatctgccatctaactgacgaaagcgcgtccatt
agcatgcgcattaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgccctatcggtcgtttgttagtagatgcttgctatagcccagta
gagcgtatcgcctacaatgttgaagcagctcgtgtagaacagcgtactgatctggataag
ctggttatcgagatggagactaacggcacaatcgatcctgaagaagcgattcgccgtgca
gctaccattctggctgaacaactagaagcttttgttgatttacgtgatgtacgtcaacca
gaagttaaagaagagaagccagaatttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagctatccactacatcggtgat
ctggtacagcgtactgaggttgagttacttaagacacctaacttgggtaaaaaatctctt
actgagattaaagacgtactggcttcacgtggactttctctgggcatgcgtctggaaaac
tggccaccagcaagtattgctgatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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