KEGG   Xenorhabdus nematophila AN6/1: XNC2_0372
Entry
XNC2_0372         CDS       T03752                                 
Symbol
rhlB
Name
(GenBank) putative ATP-dependent helicase with nucleoside triP hydrolase domain
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    XNC2_0372 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xnm03019]
    XNC2_0372 (rhlB)
Enzymes [BR:xnm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     XNC2_0372 (rhlB)
Messenger RNA biogenesis [BR:xnm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     XNC2_0372 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: CEK21371
Position
I:complement(314656..315939)
AA seq 427 aa
MSKTHLTEKKFSDFALHPKVLGALDKKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKT
LAFLASTFHYLLTHPAGKERKINQPRALIMAPTRELAVQIYSDAKELAEVTGLKMGLAYG
GDGYDKQLKVLESGVDIVIGTTGRLIDYAKQGHIHLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRIPAATERLNLLFSATLSYRVRELAFEQMNNPEYVEVEPLQKTGHRIREELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWTHLAADGHRVGLLTGDVAQKKRLRILE
EFSLGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYVLNLPSIEEYIQHQIPVSKYNSDALLKDLPVPKRRNRTRPGGHPRRINMPRRGNPT
RNRKHPS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttgacagaaaagaagttttccgacttcgcattgcaccccaaagtc
ctaggagcccttgataaaaaagggttttccaactgcacgcctatacaggcgctaacattg
ccttttactgtcgaaggccgagatgttgcggggcaagcacaaaccggaacaggcaagacg
ctggcatttttggcgtctacttttcattacttattaactcatcctgcggggaaagagcgt
aaaattaatcagccaagagcactgattatggctccaacccgtgaattagctgtccaaata
tattctgacgcaaaagaactggcggaagtcactggattgaaaatgggtcttgcctacggt
ggcgatggctatgataaacagcttaaggtgctggaatcaggtgttgatatcgttattggc
acaacaggtcgtttgatcgattatgcaaaacaaggccatattcatcttggtgcgattcaa
gttgtcgtacttgatgaagctgatcgcatgtacgatttaggctttatcaaagacattcgc
tggctgttccgccgtatcccggcagcaacagaaagactgaatttgcttttttctgcgacg
ctgtcttaccgggtgcgcgaactcgctttcgaacagatgaataaccctgaatatgtggaa
gttgaacccttgcagaaaacagggcaccgaattcgtgaagagctattttatccttccaat
gaagaaaaaatgcgtctgttacagaccttgctggaagaagaatggccggatcgttgcatc
atttttgccaataccaagcaccgctgtgaagatatctggactcatctggctgccgatggt
catcgcgttgggcttctgactggcgatgttgcccagaaaaagcgactgcgtattctcgaa
gaattcagtctgggtaatctggatattttggttgcgaccgatgtggctgcccgtggtctg
catattccatctgtgacgcatgtatttaattatgatctaccggatgactgtgaagattat
gttcaccggattggccggacaggacgcgccggagaaagcggtcactctatcagtctggca
tgcgaagaatatgtgttgaacttaccttctattgaagagtatatccagcaccagataccc
gtcagtaaatataatagtgatgcgttattaaaagatttacccgttcctaagcgccgtaat
cgtacacgtccagggggacacccacgccgtataaatatgccacgtcgtggaaatccaaca
cgcaaccgtaaacacccaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system