KEGG   Xenorhabdus nematophila AN6/1: XNC2_1243
Entry
XNC2_1243         CDS       T03752                                 
Symbol
ffh
Name
(GenBank) 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm02024  Quorum sensing
xnm03060  Protein export
xnm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    XNC2_1243 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XNC2_1243 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XNC2_1243 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xnm02044]
    XNC2_1243 (ffh)
Enzymes [BR:xnm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     XNC2_1243 (ffh)
Secretion system [BR:xnm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   XNC2_1243 (ffh)
  Eukaryotic Sec-SRP protein
   XNC2_1243 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_31 AAA_33 AAA_30 YqeC AAA_14 APS_kinase AAA_24 Helicase_RecD KTI12 VirC1 ArsA_ATPase TsaE KAP_NTPase ResIII Thymidylate_kin AAA_16
Other DBs
NCBI-ProteinID: CEK22239
Position
I:1136280..1137641
AA seq 453 aa
MFENLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFISRVKESAV
GHEVNKSLTPGQEFVKIVQNELIKAMGEVNSELNLSAQPPAVVLMAGLQGAGKTTSVAKL
GKLLKEKNKKKVLVVSADVYRPAAIKQLETLSETVGIDFFPSDPQEKPIDIVNKAIQHAK
LKFYDVLLIDTAGRLHVDEAMMDEIKAVHAAVKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFYPDRIASRILGMGDM
LSLIEEIESKVDRSQAEKLASKLKKGDGFDLSDFLDQLKQMRNMGGMTSMLSKMPGMSQI
PDAVKSQMDDKVLVKMEAIIHSMTRKEREKPEIIKGSRKRRIAMGSGTQVQDVNRLLKQF
DEMQRMMKKMKKGGLAKMMRGMKGMLPPGFMGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaactgacagactatcgcgcacattgcgcaatatcagtggccgtgga
cggctgactgaagataatattaaagatacgctgcgcgaagttcgtatggctttgctcgaa
gcggatgttgcattgcctgttgtgcgtgatttcatttcacgagtcaaagagagtgcagtg
gggcatgaggttaacaaaagtctgactcccgggcaggagtttgtaaaaatcgttcagaat
gaattgattaaggcgatgggggaggttaatagtgagctaaacctttccgctcagccacct
gctgtagttctgatggccggtttgcaaggggcgggtaaaacaaccagcgttgccaaacta
ggtaaacttctaaaggaaaaaaataagaaaaaagtattggtcgtttctgcagacgtttat
cgtcctgcggcgatcaaacagcttgaaacgttgtctgaaacggttggaattgatttcttc
ccttcagatccgcaagaaaagccaattgatatcgtcaacaaagctattcagcacgctaaa
ttgaaattctatgatgtgttgttaatcgatactgccggtcgtctgcatgttgatgaagcc
atgatggatgagattaaagctgttcatgcagcggtcaaacccgttgaaacgctgtttgtt
gtcgatgcaatgaccggtcaggatgccgcaaatacagcaaaagcatttaatgaagcattg
ccgttaacgggtgtagttctgactaaagttgatggtgatgcacgtggtggtgccgcgctt
tccattcgtcatattacgggtaagccaattaaattccttggggttggcgaaaaaaccgat
gcgctggaacctttttatcccgatcgcattgcatcccgtattctgggaatgggagatatg
ctttcactgattgaagaaattgaaagcaaagttgatcgctcccaagcggaaaaattggca
tcaaaactgaaaaaaggcgatggttttgatttaagtgatttcctcgatcagctcaaacaa
atgcgtaacatgggcggaatgaccagcatgttgagtaagatgcccggcatgtcgcagatc
cctgatgctgtcaaatctcaaatggatgataaagttttggttaaaatggaagccatcatt
cattccatgacccgcaaagagcgtgaaaaacctgagattattaaaggttcccgtaagcgt
cgtattgctatgggatcgggtacgcaagtgcaggatgttaaccgtttattaaaacagttt
gacgagatgcagcgcatgatgaaaaaaatgaaaaaaggcggcctggcgaaaatgatgcgc
ggtatgaaaggcatgttgccacccggatttatgggccgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system