KEGG   Xanthomonas oryzae pv. oryzae MAFF 311018: XOO2899
Entry
XOO2899           CDS       T00360                                 
Symbol
XOO2899
Name
(GenBank) ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
xom  Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xom00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XOO2899 (XOO2899)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xom02044]
    XOO2899 (XOO2899)
Secretion system [BR:xom02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   XOO2899 (XOO2899)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Zeta_toxin Sigma54_activat AAA_7 AAA_14 NACHT nSTAND3 TniB AAA_25 ATPase_2 AAA_18 DUF815 CbiA Hpr_kinase_C Cyclin_N
Other DBs
NCBI-ProteinID: BAE69654
Position
complement(3276177..3278882)
AA seq 901 aa
MADISRAALFGKLNKTTYRGIESATAFCRLRGDHEVELLHWLHQLLQAQDGDLHRIVRRF
SLDASRLAQDLTVALDRLPRGGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVA
ILHTRSLRHGLLAMSSEFAKLRAEALADDLDDIVAGSPEDDATDVAAAVAPVGTGATGGT
AALALYTVDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEG
FAQRIARGDVPPALQDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVD
ETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQV
DEPDEAKAVRMMRGVASTMEQHHRVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTAC
ARVAVSLHATPAEVDDSRRRIESLDTEHAIIERERAIGIVVDERAAACASLLQSEHGRLR
ELEQRWVAEKALVDALLSLRAQLRGGNAPVEGTGSALETEAEQRASGDIAVLETPVHVDR
DALLARLQLVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLLLP
ELLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLLAGTSGVGKTETALALAETLY
GGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYAVVLLDEVEKAH
PDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPELMPDPDGMAK
ALREPLLKVFPPALLGRLVAIPYYPLSNAMLGQIVRLQLNRIKQRIEERYRIPFDYDESV
VELVVSRCTESESGGRMIDAILTNSMLPEISRKFLRGVVDRKRTERLDIRVEDSALVYSF
L
NT seq 2706 nt   +upstreamnt  +downstreamnt
atggcagacatcagtcgcgccgccttgttcggcaagctcaacaagaccacctatcgcggt
atcgaatcggccactgcgttctgcaggctacgtggcgaccacgaagtggaactgctgcac
tggctgcatcagttgctgcaggcgcaagacggcgacttgcaccgcatcgtgcgccgtttt
tcgctggatgcgtcgcggcttgcacaggacctgaccgtggcgctcgatcgcctgccgcgc
ggcggtggcggacacttcgatctgtcggccagcgtggaggaggcagtggaacgcgcctgg
gtgcactgcacgttgcgttacgggcggcaacgcatccgtggcggcgatctgctggtggcg
atcctgcacacgcgtagcctgcgtcacgggttgctggcgatgtcgagcgagttcgccaag
ctgcgcgcggaagcactggcggacgatctggatgacatcgtcgccggctcgccggaagac
gatgccaccgacgttgcggcggctgtcgcccccgttgggactggcgcaacaggtggtact
gcggcgctcgcgctgtacacggtcgacctcaccgcacaagcgcgcgagggcaagctggac
ccgatcatcggccgcgacgacgagattcgccaggtcgtcgatatcctgatgcggcgccgc
cagaacaacccgatcctggttggcgaggccggcgtcggcaagaccgcggtggtggaaggc
ttcgcacaacgtatcgcgcgcggcgatgtgccgcccgcgttgcaggatgtgcagctgcgc
acgctcgatgtcggcttgctgcaagccggcgccagcatgaaaggtgagttcgagcagcgc
ttgcgcgcagtcatcgacgaagtgcaggccagccccaagccgatcattctgttcgtggat
gaaacccataccctggtcggcgccggtggcgcggccggcaccggcgatgcggccaacctg
ctcaagccggcactggcgcgcggcaccttgcgcaccgtaggcgcgaccacctttgccgag
tacaaaaagtacatcgaaaaagaccctgcattgacgcggcgcttccaggccgtgcaggtc
gacgagccggacgaggccaaggccgtgcggatgatgcgcggtgtcgcctcgacgatggaa
cagcaccaccgcgtgcagatccttgacgaagcgctggaagcggcggtcaagctcagtcac
cgctacatcccggcgcgccagctgccagacaaatcggtcagtctgctcgataccgcctgc
gcgcgcgtcgcggtgagcctgcatgccacgcctgcggaagtggacgacagccgtcgccgc
atcgaatcgctggacaccgagcacgccatcatcgagcgcgagcgtgcgattggcatcgtg
gtcgatgagcgtgctgccgcttgcgccagcctgctgcaaagcgagcacggccgcctgcgc
gagctggaacagcgctgggttgccgaaaaggcgttggtcgatgcgctgttgtcgctacgc
gcgcaactgcgaggcggcaacgcgccggtggaagggaccggcagtgcgttggaaacggag
gccgaacagcgtgcgtctggcgatatcgcggtgctcgaaacgccggtacacgtggatcgc
gatgcgctcttagcacgtttgcagttggtacaggccgaactggccgcattgcagggcgaa
tcgccgctgatcctgcccacagtcgattaccaagccgtggccgcggtggtcgccgactgg
accggcatccctgtcgggcgcatggcccgcaacgagatcgacaccgtgctgctcttgccc
gaactgctggccaagcgcgtgatcggccaggaccacgccatggagatgatcgccaagcgg
atccagaccagccgcgccggcctggacaacccggacaaaccgatcggcgtgttcctgctg
gccggaacctccggcgtcggcaagaccgaaaccgcactcgccctggccgaaacgctgtac
ggcggcgagcaaaacctgatcaccatcaacatgagcgagtaccaagaggcgcacactgtc
tcctcgctcaagggcgcaccgccgggctatgtgggctacggcgaaggtggcgtactgacc
gaagcggtgcgccgcaagccgtacgcggtcgtgctgctggacgaagtggaaaaagcccac
ccggacgtgcacgaactgttcttccaggtcttcgacaagggctggatggaagacggcgaa
ggccgccgcatcgacttccgcaacaccttgatcatccttaccagcaacgccggcaccgac
ctgatcgccagcctgtgcaaggacccggaattgatgccggatccggacggcatggccaag
gcattgcgcgaaccgttgttgaaggtgtttccgccggcattgctcgggcggctggtggcg
attccgtattacccgctcagtaacgccatgctcggacagatcgtgcgattgcagttgaac
cgcatcaagcagcggatcgaagagcgctacaggattccgttcgactacgacgagtctgta
gtggagctggtggtgagccggtgtaccgagagcgaatcgggtggccggatgatcgatgcg
attttgactaactcgatgttgccggagattagccgcaaatttcttcgtggggtagtggac
cggaaacggactgaacgccttgacattcgtgtcgaagattccgcattggtttattcgttt
ctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system