KEGG T00235: XOO0702

Xanthomonas oryzae pv. oryzae KACC 10331: XOO0702

Entry

XOO0702           CDS       T00235

Symbol

rsmC

Name

(GenBank) ribosomal RNA small subunit methyltransferase C

K00564

16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]

Organism

xoo Xanthomonas oryzae pv. oryzae KACC 10331

Brite

KEGG Orthology (KO) [BR:xoo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xoo03009]
    XOO0702 (rsmC)
Enzymes [BR:xoo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.172  16S rRNA (guanine1207-N2)-methyltransferase
     XOO0702 (rsmC)
Ribosome biogenesis [BR:xoo03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    XOO0702 (rsmC)

SSDB

Motif

Pfam:

MTS Methyltransf_25 Methyltransf_12 MTS_N Methyltransf_23 UPF0020 Methyltransf_11 Cons_hypoth95

Other DBs

NCBI-ProteinID:

AAW73956

UniProt:

Q5H514

Position

723529..724626

AA seq 365 aa
MAACSRPDDPMAGPHDAPLQALFLPFAQGVLPWPEGPVLFLRARDGFPLREQAVAETLTC
EQSFRPFAEALERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGG
RVVACQSNNEGARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATLQARWAALDAP
RKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKV
TVLDLYEAQTRALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRAD
RPDIGQRFIAVAAQALRPGGQLLLVANRHLPYEQVLNESFGQVRVAAERDGFKLISAIRG
RGARA

NT seq 1098 nt +upstreamnt +downstreamnt
atggcggcctgttcccgacccgatgatccgatggctggcccgcacgatgccccgcttcaa
gccctgttcctgcccttcgcccaaggcgtgctgccgtggccggaggggccggtgttgttc
ctgcgcgcacgcgacggtttcccgctgcgcgagcaggcggtggccgagacgctgacctgc
gagcagagcttccgcccgttcgccgaagcgctggagcgtaacggctggaacgtgcgtgaa
gaaagcgagatcgaggccgacagcacgcgctatgcactggtgctggtgctgccgccgcgg
cagcgcgaagaagcgcgcgccctgttcgcacgtgcggtggcgctgactgcgcccggtggc
cgcgtggtggcctgtcagtccaacaacgaaggcgcgcgctcgggtgaagccgatctgcgc
cagctcaccgggctggcaggtagcctgaccaaacaccactgccgcacctactggactgcg
ccgctgccggccgacaccgacgccacgctgcaggcgcgctgggcagcgctggatgcgcca
cgcaagatcctggacggccgctttgtcagccgtcccggtgtattcgcctgggatcgcatc
gacccggcatcggcgctgctggtcgagcatctgcccaccacgctggctggtcatggcgcc
gatctgggcgcaggcttcggttatctatcggccgaagtgctggcgcggtgccccaaggtc
actgtgctggatctgtacgaagcccagacgcgcgcgctgacgctggcgcggcgcaatctg
cagggcatcacgcatccggcgcagctgcactaccactggcgcgatgtcaccgccgggctg
gtggcgcactacgatttcatcgtcagcaatccgcctttccatacaccctcgcgtgccgac
cgcccggatatcggccaacgcttcatcgcggtggctgcacaggcgctgcgcccgggcggg
caactgttgttggtggccaaccggcatttgccctacgaacaggtgctcaacgaaagtttc
gggcaggtgcgcgtggctgcagagcgcgatggtttcaagctgatctcggccatccgcggc
cgtggagcgcgcgcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system