KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO3968
Entry
XOO3968           CDS       T00235                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00550  Peptidoglycan biosynthesis
xoo01100  Metabolic pathways
xoo01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    XOO3968 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    XOO3968 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:xoo01011]
    XOO3968 (mrdA)
Enzymes [BR:xoo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     XOO3968 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:xoo01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   XOO3968 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AAW77222
UniProt: Q5GVQ1
Position
complement(4241727..4243787)
AA seq 686 aa
MHGRRHPKNPHAEAEQFRRRAVLGFAMVLICLVGLGGWYFKLQVLDHEVYTTRSEANRIK
PKPVVPGRGMIYDRTGRLLAENVPAFRLDVTPDKVTDMSAMLDALGNVIPISPEDLERFN
RERHARRSFLPVTLKLRMSDEEMARFAVERWRFPGVELEPYLTRRYPYGPLFAHIIGYVG
RIDEKDLAMLGEGNAALTHMGKSGLERYYEQDLRGQVGYEQVETNVQGRAIRTVGRVAPQ
SGADLRLSVDADLQRAMVAAFGEHEGAAIAMDPRTGEILGMVSLPSYDPNLFVNGISHTD
FKMLNDNPSRPQFNRLVLGGVAPGSTLKPLIALAGLDSGVRRPEDRVLSTGMFYLPGVSR
GWGDSHRGGHGWTDLRKSIAQSVNTYYYRLAVDMGIERFDHYLGEYGFGQPTGVDLLGEI
GGILPSPAYKYKTRKERWYPGDTVNIAIGQGDWKVTPLQLVRGVSAIASGLLLRPHLVLE
ERTGFDHPWEPMIQPPGKPISPNPAHLQVVREGMMDTMRPGGTGYAITPGAPYQMAGKTG
TAQVVSRKGVAAVDPRSLPLHLRHRGLFVGFAPADHPVIAVAVAVEGGGFGTSSAAPIAR
KIFDAWLLGKMPAGLEPLDSELGMTAVGVNRFEAGVTDARAAGDAAAATLDELPVVVGQT
AVALDPNTPAQPVVPDVPDAVQETDH
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgcacgggcgccgtcatcccaagaatccgcatgccgaggccgaacagttccgccgccgc
gcggtgctgggctttgcgatggtgctgatttgcctggtcggcctgggcggttggtacttc
aagttgcaggtgctcgatcacgaggtgtataccacgcgctcggaggccaatcgcatcaag
cccaagccggtagtgcctgggcgcggcatgatctacgaccgcaccggccggctgctggcc
gaaaacgtgccggccttccgcctggacgtgacccccgacaaggtcaccgacatgagcgcc
atgctggacgcgctcggcaacgtcatcccgatctcgccggaggacttggagcgcttcaac
cgcgagcggcacgcacgacgcagcttcctgccagtgacgctcaagctgcgcatgagcgat
gaagagatggcgcggtttgcggtggagcgctggcgcttccccggcgtggagctggagccg
tatctgacccgccgttatccctatggaccgttgttcgcgcacatcatcggctatgtgggc
cgtatcgatgaaaaagacctggcgatgctgggcgagggcaatgccgcgctgacccacatg
ggcaaatccgggctggagcgctattacgagcaggatctgcgcgggcaggtcggttacgag
caggtcgaaaccaacgtgcaggggcgggcgatccgcaccgttggccgggtcgcgccgcaa
tcgggtgcggacctgcgcctgtcggtagacgccgatctgcagcgcgccatggtggcggca
ttcggcgagcacgaaggcgcggccatcgcaatggacccgcgcaccggcgagatcctgggc
atggtcagcctgcccagctacgaccccaatctgttcgtcaacggcatctcgcataccgat
ttcaagatgctcaacgacaacccgtcgcggccgcagttcaatcgcctggtgctgggcggc
gtggcgccgggctccacgctcaagccgctgatcgcgctggctggcctggacagcggcgtg
cgccggccggaagaccgggtgttgtccaccggcatgttctacctgcccggcgtgagccgc
ggctggggcgattcgcaccgcggcgggcatggctggaccgacctgcgcaaatccatcgcc
cagtcggtcaatacctattactaccgcctggcggtggatatgggcatcgagcgcttcgac
cactacctgggcgaatacggcttcggccagcccaccggtgtggatctgctgggcgaaatc
ggcggcatcctgccgtcgccggcctacaagtacaagacccgcaaggagcgctggtatccc
ggcgacacggtcaatatcgcgattggtcagggcgactggaaggtgacgccgctgcagctg
gtgcgcggcgtctcggcgatcgccagtggcctgctgctgcgcccgcatctggtgctggaa
gaacgcaccggcttcgatcacccgtgggaaccgatgatccagccgccgggcaagccgatc
agcccgaatccggcgcatctgcaggtagtgcgcgaaggcatgatggacaccatgcggccc
ggcggcaccggctatgccatcacgcccggtgcgccgtaccagatggccggcaagaccggt
accgcgcaggtggtcagccgcaagggcgtggcggcggtggacccacgcagcttgccgttg
cacttgcgccaccgcggtctgttcgtcggctttgcgccggccgatcacccggtcatcgcg
gtggcagtggcggtggaggggggcggcttcggtaccagctcggcggcgccgattgcgcgc
aagatcttcgatgcctggctgctgggcaagatgcccgccggcctggagccgttggacagc
gagctcggcatgaccgccgtaggcgtcaatcggttcgaagccggcgtcaccgatgcgcgc
gcagccggcgatgcggcagccgccacgctggacgagctgccggtggtggtcggacagacc
gccgttgcgctggaccccaacacgcccgcgcaaccggtggtgccggatgtgccggacgcg
gtgcaggagaccgaccattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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