KEGG   Xanthomonas oryzae pv. oryzae PXO99A: PXO_00415
Entry
PXO_00415         CDS       T00763                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
xop  Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PXO_00415 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xop03400]
    PXO_00415 (xseA)
Enzymes [BR:xop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     PXO_00415 (xseA)
DNA repair and recombination proteins [BR:xop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PXO_00415 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Gly_transporter
Other DBs
NCBI-ProteinID: ACD58553
UniProt: B2SHP3
Position
complement(1983832..1985169)
AA seq 445 aa
MAERNEQILTPSQLNALARDLLEGSFPLVWVEAELSSVTRPSSGHLYFTLKDARAQIRCA
MFKPKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARL
AAEGLFDAERKQLLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSA
AAQITSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGHETD
FSLSDFVADVRAPTPSVAAELLVPDQRELVPRVRRAQARMTQLQQHALGNAMQRADRLAL
RLRAHSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNPQRHLAGLQ
QRLRALHPQAAMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAE
VAAGERLRAQLADGSIEVRVEPGER
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggccgagcgcaacgaacagatccttactcccagccagctcaatgcgctagcgcgcgac
ctgctggaaggcagcttcccgctcgtatgggtggaagccgaactgagcagcgtcacccgg
ccctcgtcggggcatctgtatttcacgctgaaggatgcgcgtgcgcagatccgttgcgcg
atgttcaagcccaaaagcacctggctgaaattccagccgcgcgaaggcttgcgcgtgctg
gcacgcgggcgcctgaccctgtacgaagcacgcggcgactaccagctggtgctcgaccat
atggaagaagccggcgaaggcgcgttgcgtcgcgccttcgacgcactgcgtgcacgcctt
gctgcagaaggcctgttcgatgccgagcgcaagcagttactgccggcgcatgttcagcgg
ctagcggtcatcacttcgcccagcggcgcggcggtgcgcgatgtgctcagcgtactggcg
cggcgctttccgctactcgaagtggatctgctgccctcgctggtacaaggcgacagcgct
gccgcacagatcacctcgctgctgcaacgcgccgatgcgtccgggcgctacgacgtcatc
ctgatcacccgcggcggcggctcgctggaagatctgtgggccttcaacgacgaacgcctg
gcgcgtgcgattgccgctgcgcagacgccggtggtgtctgcggtcggccacgagaccgac
ttcagcctcagcgatttcgtggccgacgtgcgtgcgcccacaccgtcggtggcggccgaa
ttgctggtgcccgatcaacgcgagctggtcccgcgcgtgcgacgcgcgcaggcccgcatg
acccagctgcagcaacacgccttgggcaatgccatgcaacgcgccgaccggcttgcgctg
cgcctgcgtgcgcatagcccgcaggcgcgcctgcaactgcttcatcgccgacaggaagag
gccggtcgccagctgggtgcgcgcatgacgcaagtgctcgagcgcttgcaggcgcgtgtg
cagcgtgggcacgcgcaggtgcaatcacacaacccgcaacgtcatctggccggcttgcag
caacgcctgcgggcattgcatccccaggcggcgatgcaacgacgcttgcagcacgatcaa
ctgcagctgcgcagcattgcgcgctcgctggaagcggtcaatccgctggccacggttgcg
cgtggctacgccatcgtgacccgccctgccgatggcagcgtggtgcgcagcgccgccgag
gtggcagcaggcgagcgcctgcgcgcacagctggccgatggcagcatcgaggtgcgcgta
gagcccggcgagcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system