KEGG   Xanthomonas oryzae pv. oryzae PXO99A: PXO_04696
Entry
PXO_04696         CDS       T00763                                 
Symbol
imcF
Name
(GenBank) ImcF-related family
  KO
K11891  type VI secretion system protein ImpL
Organism
xop  Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xop00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PXO_04696 (imcF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xop02044]
    PXO_04696 (imcF)
Secretion system [BR:xop02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PXO_04696 (imcF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Snapin_Pallidin
Other DBs
NCBI-ProteinID: ACD57961
UniProt: A0A0K0GIE7
Position
1314047..1317739
AA seq 1230 aa
MILGLLAAAAVAYFGTEGLREIGLWAAAVLAVCLTIWLLVWIVRRIIARRAARSLDAMVQ
GEADRAVAAAQPANRADTEALRSRMLEAVKAIKSSRLGVLKGKAALYELPWYVIIGNPAA
GKSTAILNSGLQFPFEDNRGNVIQGIGGTRNCDWYFTMTGIVLDTAGRYSVSVEDRLEWL
TFLALLKKHRPRAPINGIIIAASIAELSGSKPEFAIELAKNLRQRVQEITQRLEVFAPVY
VVFTKADLIAGFSEFFHNLDPSERENVWGATLPYDPTANTDALAAFDTHFDELAEGLKEM
SLAHMAMQRGRQVSPGLLTLPLEFVGIKPALRTFIATLFEENPYQFKPVFRGFYFSSALQ
EGHSVHHASERVSRQFALQARAQSGEAVPSGQTAYFLKDLFRKVIFTDKQLVRQYSSPHQ
NRLRYGVFLGGVAVLALALGLWTWSYTTNVQLVNNATKDLDQAVRVQANRVDLQSRIDAL
LLLQDRLEQLDRYKQKGGITSGLGLYQGGNIRKKLLAEYYNGMRQVMLEPTTANLESFLG
QVVSERDRLGKAAGPQQAAQQDSVLYQDASPTDTNDAYNALKTYLMLGNRKHVESAHLTQ
QLTLFWRGWLDANRGQMTREEMTRAAEKLMTFYVAQAEDAQWPQVQTKVTLVNDSREALT
RVMKGQPAMQRVFAQIKARAAARFPTVTVNALIGEEANSGAITGSYAISGAFSREAWEEY
VKDAIKEAANTQLSTTDWVLDTSEQSDLSLAGSPEHVARELVTAYKQEYAKEWRKFIQGI
SVAPFHGFDQALSRMNRIGDPANSPLRKLLEKINEQTIWDNPMADALSKKASGGVVAWFQ
RVILRRDPAEAGKAEQQPVGPIGKTFEGLARLMTKRTDQPAVIDAYFDKLAKLRTRMNAI
KNQGQIGVGARKLMQDTFSNEGSELSAALTLVDEQMLTGLDETQRDAMRPLLLRPLTQTF
AALVPPTENEINRVWAAQVYEPFRNGIGQRYPFNLNTDVDAAPGDVAAIFGASGAIAAFN
KDALGTLVIQRGNLLESRRWAGIGITLSSELVANYGNWVSGQSGAVAKDVSIFELLPMPA
VGAIEYTIDISGQTLRYRNTPPQWMTMQWPNAGAVPGAKITAVTSDGRSVEMFNAPGDNG
LGRLIKAAAQEPVDDATRRFTWSDQGVSISVQMRIVQSAGKATGGGDWQRGLQLPATVAG
SPTTVGADAPAAAAPPGSVPAGASAQEGGQ
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgattctcggcttgctcgccgccgccgcagtcgcctacttcggcaccgagggcttgcgc
gaaattggcctgtgggcggcggcggtgctggcggtctgtctgacgatatggctgctggtg
tggatcgtgcgccggatcattgcgcgccgcgctgcgcgcagcctggatgcgatggtgcaa
ggcgaagccgatcgcgcggtcgccgccgcgcagccggccaaccgcgccgacaccgaagcg
ctgcgctcgcgcatgttagaggcggtcaaggcgatcaagtcctcgcgcctgggcgtgctc
aagggcaaggcggcgctgtacgaactgccgtggtacgtgatcattggcaatcctgcggct
ggcaagagcaccgcgatcctcaattccgggttgcagttcccgttcgaggacaatcgcggc
aacgtgatccagggcatcggcggcacgcgcaattgcgattggtacttcaccatgaccggt
atcgtgcttgataccgccggtcggtattcggtcagtgtcgaagaccgcctggaatggctc
acctttctcgcgctgctgaaaaagcaccggccgcgcgcgccgatcaacggcatcatcatc
gccgccagcatcgccgaactgtccggtagcaagcccgagttcgcgatcgagctggccaag
aacctgcgccagcgcgtgcaggaaattacccagcgcctggaagtgttcgcgccggtgtac
gtggtgtttaccaaggccgacctgatcgccggcttctccgaattcttccacaatctggat
ccgtccgagcgcgagaacgtgtggggtgcgaccctgccctacgatccgaccgccaatacc
gatgcgctggccgccttcgacactcatttcgacgaactggccgaaggcctcaaggaaatg
agcctggcgcacatggcgatgcagcgtgggcgtcaggtgtcgccgggcctgctgacactg
ccgctggagttcgtcggcatcaaaccggcgctgcgcaccttcatcgccacgctgttcgaa
gaaaacccctatcagttcaagccggtgttccgcggtttctacttcagcagcgcgttgcag
gaaggccattccgtgcaccacgcctccgagcgggtgagccgccagttcgcgctgcaggcg
cgtgcgcaatccggcgaagcggtgccgtcgggacagaccgcttacttcctgaaagacctg
ttccgcaaggtcatcttcaccgacaaacagctcgtccggcagtactccagcccgcaccag
aaccgcctgcgctacggcgtcttcctcggtggcgtcgccgtgctggcgttggcgctgggt
ctgtggacctggtcgtacaccaccaacgtgcaactggtgaacaacgccaccaaggatctg
gatcaggccgtgcgcgtgcaggccaaccgggtcgacttgcaatcgcgcatcgacgcgctg
ctgctgttgcaggatcggctcgagcagctggaccgctacaagcaaaagggcggcatcacc
tccgggctgggcctgtaccagggcggcaacatccgcaagaagctgctggccgagtactac
aacggcatgcgccaggtgatgcttgagccgaccaccgccaatctggagtcgttcctgggg
caagtggtcagcgagcgcgacaggctcggcaaggcggccggcccgcagcaggccgcgcag
caagacagcgtgctgtatcaggacgcgtcgccgaccgataccaacgacgcctacaacgcg
ctgaagacctacctgatgctgggcaaccgcaagcacgtggagagcgcgcacctgacgcag
cagctgaccctgttctggcgcggctggctggacgccaatcgcggccagatgacccgcgag
gagatgacccgcgcggccgagaagctgatgacgttctacgtcgcccaggccgaagatgcg
cagtggccgcaggtgcagaccaaggtcaccctggtcaacgacagccgcgaggcgctgacc
cgggtgatgaagggccagccggcgatgcaacgcgtattcgcgcagatcaaggcgcgcgcg
gcggcgcgcttccccacggtgacggtcaacgcgctgatcggcgaggaagccaacagcggc
gcgatcaccggcagctatgccatttccggggcgttctcgcgcgaggcgtgggaagaatac
gtcaaggacgcgatcaaggaagcggccaatacgcagctcagcaccaccgactgggtcctg
gacacgagcgagcagagcgacctgtcgctggccggcagccctgagcacgtcgcgcgcgaa
ctggtgacggcgtacaagcaggaatacgccaaggagtggcgcaagttcatccaggggatc
agcgtggcgccgttccatggcttcgaccaggcgctgtcgcggatgaatcgcatcggcgat
ccggccaactcgccgttgcgcaagctgctggaaaagatcaacgagcagaccatctgggac
aacccgatggccgacgccttatcgaagaaggcgtccggcggggtcgtcgcctggttccag
cgggtgatcctgcgccgcgatccggccgaagccggcaaagctgagcagcagccggtcggc
ccgatcggcaagaccttcgagggcctggcgcggctgatgaccaagcgcacggaccagccg
gcggtcattgatgcctacttcgacaagttggccaagttgcgcacgcgcatgaacgcgatc
aagaaccagggccagatcggcgtcggcgcgcgcaagctgatgcaggacaccttcagcaac
gaaggctccgaactcagcgccgcgctgaccctggtggacgagcagatgctgaccgggctg
gatgaaacccagcgcgacgcgatgcgtccgctgttgctgcgtccgttgacccagaccttc
gccgcgctggtgccgccgactgagaacgagatcaaccgggtgtgggcggcgcaggtctac
gaaccgttccgtaacggcatcggccagcgctatccgttcaacctcaacacggacgtggat
gccgcccccggcgacgtggctgcgatcttcggcgccagcggcgcgatcgccgcgttcaac
aaggacgcactcggcaccttggtgatccagcgcggcaacctgctcgaatcgcggcgttgg
gcgggcatcggcatcaccttgtccagcgaactggtggccaactacggcaactgggtcagc
ggccagtccggcgcggtggccaaggacgtcagcatcttcgagctcctgccgatgccggcg
gtaggcgcgatcgaatacaccatcgacatctctggccagacgctgcgctaccgcaacacc
ccgccgcagtggatgaccatgcagtggccgaacgccggtgcggtgcccggtgccaagatc
accgcggtcaccagcgacgggcgcagcgtcgagatgttcaatgcgcctggcgacaatggc
cttggccgcttgatcaaggcagccgcccaggaacccgtggacgatgccacccgtcgcttc
acctggagcgaccaaggcgtgtccatcagcgtgcagatgcgcatcgtgcagagtgccggc
aaggctaccggggggggcgactggcagcgtggcctgcaacttccggcgacggtggccggt
agcccgacaaccgtcggtgccgatgcgccagcggccgctgcgccgcccggttcggttccg
gcgggtgcgtccgcacaagaaggtggccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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